Detailed information NTG0721163

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: PUW77_RS11155
• Genome accession: NZ_CP118079
• Coordinates: 2178707..2179816 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain VSI15
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2173707..2184816

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUW77_RS11130 (PUW77_11130)	-	2174079..2174918 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
PUW77_RS11135 (PUW77_11135)	pgsA	2174918..2175460 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
PUW77_RS11140 (PUW77_11140)	-	2175583..2176866 (-)	1284	WP_000217765.1	pitrilysin family protein	-
PUW77_RS11145 (PUW77_11145)	-	2176868..2178112 (-)	1245	WP_000706190.1	pitrilysin family protein	-
PUW77_RS11150 (PUW77_11150)	yaaA	2178351..2178704 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
PUW77_RS11155 (PUW77_11155)	recF	2178707..2179816 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
PUW77_RS11160 (PUW77_11160)	-	2179828..2180694 (-)	867	WP_000398683.1	GRP family sugar transporter	-
PUW77_RS11165 (PUW77_11165)	-	2180750..2181412 (-)	663	WP_001871057.1	helix-turn-helix transcriptional regulator	-
PUW77_RS11170 (PUW77_11170)	guaB	2181487..2182968 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
PUW77_RS11175 (PUW77_11175)	-	2183125..2183610 (-)	486	WP_001034427.1	arginine repressor	-
PUW77_RS11180 (PUW77_11180)	-	2183620..2184300 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=721163 PUW77_RS11155 WP_000264870.1 2178707..2179816(+) (recF) [Streptococcus agalactiae strain VSI15]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=721163 PUW77_RS11155 WP_000264870.1 2178707..2179816(+) (recF) [Streptococcus agalactiae strain VSI15]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447