Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NF399_RS01120 Genome accession   NZ_CP103049
Coordinates   254149..254814 (+) Length   221 a.a.
NCBI ID   WP_002436233.1    Uniprot ID   A0A0S4M7T5
Organism   Staphylococcus capitis subsp. capitis strain DSM 20326     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 249149..259814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NF399_RS01095 - 249236..249862 (-) 627 WP_002454132.1 FMN-dependent NADH-azoreductase -
  NF399_RS01100 - 250133..250234 (+) 102 WP_016898541.1 SE2200 family small protein -
  NF399_RS01105 - 250419..251961 (+) 1543 Protein_214 NAD(P)H-binding protein -
  NF399_RS01110 - 252155..253639 (-) 1485 WP_002454130.1 alkaline phosphatase -
  NF399_RS01115 - 253966..254118 (+) 153 WP_002436229.1 hypothetical protein -
  NF399_RS01120 braR 254149..254814 (+) 666 WP_002436233.1 response regulator transcription factor Regulator
  NF399_RS01125 braS 254820..255716 (+) 897 WP_002454129.1 sensor histidine kinase Regulator
  NF399_RS01130 - 255826..256575 (+) 750 WP_002436183.1 ABC transporter ATP-binding protein -
  NF399_RS01135 - 256577..258592 (+) 2016 WP_002454128.1 ABC transporter permease -
  NF399_RS01140 - 258817..259635 (+) 819 WP_064262697.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25518.37 Da        Isoelectric Point: 4.3102

>NTDB_id=721153 NF399_RS01120 WP_002436233.1 254149..254814(+) (braR) [Staphylococcus capitis subsp. capitis strain DSM 20326]
MKILIVEDDLVIAESLANELSKWNYEVNVVENFDQIMEDFRETEPQLVLLDINLPTLNGFHWCQEMRKESNVPIMFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSVSNDELDVKGCKLILDEAKLVKDDDAVQLSLTELQILK
MLFQNEGKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDFIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=721153 NF399_RS01120 WP_002436233.1 254149..254814(+) (braR) [Staphylococcus capitis subsp. capitis strain DSM 20326]
ATGAAGATTCTCATAGTCGAAGATGATTTAGTTATTGCTGAGAGCTTGGCTAATGAACTTTCAAAATGGAATTATGAAGT
GAATGTTGTTGAAAACTTTGATCAAATTATGGAAGATTTTCGTGAAACAGAACCACAACTAGTATTATTAGATATCAACT
TACCTACACTCAATGGATTTCATTGGTGCCAAGAAATGCGCAAAGAATCTAATGTTCCTATCATGTTTATTAGTTCGAGA
ACTGATAATATGGATCAAATTATGGCTATTCAAATGGGTGGCGATGACTTTATTGAGAAACCATTCAATTTATCGCTAAC
AGTAGCGAAGATACAAGCGTTACTTCGCCGTACATACGATTTATCCGTATCAAATGATGAATTAGATGTGAAAGGTTGCA
AGTTGATTCTCGATGAGGCGAAACTCGTAAAGGATGATGATGCTGTTCAATTGTCATTAACAGAACTTCAAATTTTGAAA
ATGTTATTCCAAAATGAAGGAAAATACGTGAGTCGTACAGCATTAATTGAAAAGTGTTGGGAATCTGAAAACTTTATTGA
TGACAATACCTTAGCAGTTAATATGACTAGATTACGCAAGAAGTTATTATCTATAGGCGTTGATGATTTTATTGAAACTA
AGAAAAATGTCGGATATAGGGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0S4M7T5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

83.258

100

0.833