Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   NV391_RS05950 Genome accession   NZ_CP103039
Coordinates   1184169..1185437 (-) Length   422 a.a.
NCBI ID   WP_075887596.1    Uniprot ID   -
Organism   Companilactobacillus crustorum strain X66     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1179169..1190437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NV391_RS05945 (NV391_05955) - 1182448..1184154 (-) 1707 WP_075887597.1 proline--tRNA ligase -
  NV391_RS05950 (NV391_05960) eeP 1184169..1185437 (-) 1269 WP_075887596.1 RIP metalloprotease RseP Regulator
  NV391_RS05955 (NV391_05965) - 1185457..1186251 (-) 795 WP_075887595.1 phosphatidate cytidylyltransferase -
  NV391_RS05960 (NV391_05970) - 1186270..1187013 (-) 744 WP_057866777.1 isoprenyl transferase -
  NV391_RS05965 (NV391_05975) frr 1187018..1187575 (-) 558 WP_057866776.1 ribosome recycling factor -
  NV391_RS05970 (NV391_05980) pyrH 1187565..1188299 (-) 735 WP_057866775.1 UMP kinase -
  NV391_RS05975 (NV391_05985) tsf 1188930..1189808 (-) 879 WP_057866774.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 45696.25 Da        Isoelectric Point: 9.8558

>NTDB_id=721133 NV391_RS05950 WP_075887596.1 1184169..1185437(-) (eeP) [Companilactobacillus crustorum strain X66]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKIVAYRKNHTTYTLRLLPLGGYVRMAGAQEDDSEIQPG
TMASLVLNDNDKVIKIITSSKVYDANAVPVQISKADLVDDLVIEGYENGDETVTKKYSVDHDATIVEEDGTEVQIAPRDV
QLQSVSVWKRMITNFAGPFNNFVLAILAAILAAFMMGSVGTGTNQLGGIENNSVAQKAGLKANDKILSVNGKKTTSWTSL
TESIQNNPGKKLTLNVQSGNKTKQVKLTPKAVKSSGQSYGMIGIKAKLDSSVLGKIKYGFTYSWSTSLTIFHALGKMVSG
GFNINQLSGPVGIYSMTSKVASTGLINIILFTSMLSMNLGIVNLIPIPALDGGKILLNIVEAIRRKPIPEQYENVITLIG
VGILVLLMIAVTWNDIQRFFIK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=721133 NV391_RS05950 WP_075887596.1 1184169..1185437(-) (eeP) [Companilactobacillus crustorum strain X66]
ATGACCGCGATAATTACATTTATAATCGTTTTTGGTATTTTAGTAATCGTTCATGAATTTGGACACTATTATGCTGCAAA
AAAATCAGGAATTTTGGTTCGTGAGTTTTCTGTTGGTATGGGTCCTAAAATTGTTGCGTATCGGAAAAATCATACGACGT
ATACTTTGAGGCTATTGCCTTTGGGTGGATATGTTCGTATGGCTGGTGCGCAGGAAGATGATTCCGAAATTCAACCAGGA
ACAATGGCATCTTTAGTTTTAAATGATAATGACAAAGTAATAAAAATAATAACTTCAAGTAAAGTTTATGATGCAAACGC
GGTTCCAGTTCAAATCTCAAAAGCTGATCTTGTAGATGATTTAGTAATTGAAGGATATGAGAATGGTGATGAAACAGTCA
CTAAGAAGTATTCCGTAGATCATGATGCAACTATCGTTGAGGAAGACGGAACAGAAGTCCAAATTGCTCCTCGTGATGTT
CAATTGCAGTCTGTTTCCGTATGGAAACGTATGATCACCAATTTTGCTGGACCATTTAATAATTTTGTTTTGGCCATTTT
AGCAGCTATTTTGGCTGCTTTTATGATGGGTTCAGTTGGAACCGGAACCAATCAATTGGGCGGAATTGAAAACAATTCTG
TGGCCCAAAAGGCTGGTTTAAAAGCAAATGATAAGATTTTAAGCGTTAATGGCAAGAAAACGACTTCGTGGACTAGTCTG
ACTGAGAGTATTCAAAATAATCCTGGGAAAAAATTAACGTTAAACGTACAGTCTGGTAATAAGACAAAACAAGTCAAGTT
GACTCCAAAAGCGGTCAAATCTTCTGGTCAAAGTTATGGAATGATTGGAATAAAGGCTAAATTGGATTCAAGTGTCCTTG
GTAAGATCAAATATGGATTTACATATAGCTGGAGTACATCATTAACCATTTTCCATGCTTTAGGAAAAATGGTTTCAGGA
GGCTTTAATATTAATCAGCTGTCGGGACCAGTGGGAATCTATTCAATGACTTCTAAGGTAGCCTCAACAGGTTTGATCAA
TATAATTCTCTTTACATCAATGTTATCGATGAACTTAGGTATTGTTAATTTGATACCTATTCCTGCTTTAGATGGTGGGA
AAATTCTTCTAAATATTGTTGAAGCAATTAGAAGAAAGCCAATTCCAGAACAGTATGAAAATGTTATTACATTAATTGGA
GTCGGAATCTTAGTTCTATTGATGATTGCTGTTACATGGAATGACATCCAGCGCTTCTTTATAAAATAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-407)

PDZ domain (PDZ_6)

(212-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.357

100

0.488
  eeP Streptococcus thermophilus LMD-9

48.122

100

0.486