Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   TEPE_RS11945 Genome accession   NZ_CP102984
Coordinates   2405317..2407086 (-) Length   589 a.a.
NCBI ID   WP_228107314.1    Uniprot ID   -
Organism   Terrisporobacter petrolearius strain JCM 19845     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2400317..2412086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TEPE_RS11930 - 2401301..2401792 (-) 492 WP_228107311.1 GNAT family N-acetyltransferase -
  TEPE_RS11935 - 2401968..2403308 (-) 1341 WP_228107312.1 protein kinase domain-containing protein -
  TEPE_RS11940 rcrQ 2403561..2405324 (-) 1764 WP_228107313.1 ABC transporter ATP-binding protein Regulator
  TEPE_RS11945 rcrP 2405317..2407086 (-) 1770 WP_228107314.1 ABC transporter ATP-binding protein Regulator
  TEPE_RS11950 - 2407279..2407956 (+) 678 WP_228107315.1 response regulator transcription factor -
  TEPE_RS11955 - 2407946..2409010 (+) 1065 WP_228107316.1 sensor histidine kinase -
  TEPE_RS11960 - 2409105..2409368 (-) 264 WP_416390184.1 transposase -
  TEPE_RS11965 - 2409481..2410884 (-) 1404 WP_228107317.1 protein kinase family protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65970.83 Da        Isoelectric Point: 8.9828

>NTDB_id=721071 TEPE_RS11945 WP_228107314.1 2405317..2407086(-) (rcrP) [Terrisporobacter petrolearius strain JCM 19845]
MLKILKYLTKKDWMFVLCSFLFVVTQVYLDLRLPDYMSEITRLVQTPNSEMSEILSTGGYMLLCAFGSLIAAFIVGYFAA
QIASNLSWKLRSSVYDKIEGFSMAEINKFSTPSLITRSTNDITQIQNVVAMGLQLIIKAPITAVWAVCKIIDKGWQWSSA
TGGAILVLVLIILVIMIFALPRFKKIQKLNDRLNLVTRENLTGIRVVRAYNAENYQNNKFENVNEEITKNNLVINRVMSI
MQPGMMFVMNGLTLAIYWIGAYLINDADIMDKMNLFSNMIVFSSYSMQVIMAFMMLTIIFIMMPRASVSAKRILEVLNTK
ESIVDGDGKFEKTSKTGEIEFKNVSFKYPDSEGSDYVLRDISFTAKMGETVAIIGSTGSGKTSLINLIPRFYDATEGEVL
VNGVNVKKYKQKELNNLLGYVHQKAVLFSGDITSNVAYGNNGKENYSELDVKRAVKIAQGTEFVENMENTYKASISQGGS
NVSGGQKQRLSIARAICRKPEIYIFDDSFSALDYKTDRKLRSVLKHEISNATNLIVAQRIGTIIDADKIIVLDEGQIAGM
GTHHELMKKCGVYQEIAYSQLSKEELANA

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=721071 TEPE_RS11945 WP_228107314.1 2405317..2407086(-) (rcrP) [Terrisporobacter petrolearius strain JCM 19845]
ATGTTAAAGATATTGAAATATTTAACAAAAAAAGACTGGATGTTTGTACTTTGCAGCTTTTTATTTGTAGTAACGCAAGT
ATATCTTGATTTAAGACTACCAGATTATATGTCAGAAATAACAAGATTAGTTCAGACACCAAATAGTGAAATGAGCGAAA
TATTAAGTACTGGAGGTTATATGCTACTGTGTGCCTTTGGTAGTTTAATAGCAGCTTTTATAGTAGGTTATTTTGCAGCC
CAAATAGCTTCAAATTTATCATGGAAACTTCGTTCAAGTGTATACGATAAAATAGAAGGATTCTCAATGGCTGAAATTAA
TAAATTTTCTACACCTAGTTTAATAACACGTTCAACTAATGATATTACTCAAATTCAAAATGTTGTGGCTATGGGGCTTC
AATTAATAATAAAAGCTCCCATTACAGCAGTTTGGGCAGTTTGTAAGATTATAGATAAAGGATGGCAATGGAGTAGCGCC
ACTGGTGGAGCCATATTAGTTTTAGTATTAATTATCTTAGTAATAATGATATTTGCCTTACCTAGATTTAAAAAGATTCA
AAAATTAAATGACAGACTTAATTTAGTAACAAGAGAAAATTTAACAGGAATACGTGTAGTTCGTGCATATAATGCAGAAA
ACTATCAAAATAACAAATTTGAAAATGTAAATGAAGAGATAACTAAAAACAACTTAGTAATAAATAGAGTTATGTCAATA
ATGCAACCAGGAATGATGTTTGTTATGAATGGGTTAACACTTGCCATATACTGGATAGGTGCTTATTTAATAAATGATGC
AGATATTATGGATAAAATGAATTTATTTAGTAATATGATAGTCTTCTCATCTTATTCAATGCAGGTAATAATGGCATTTA
TGATGTTAACAATCATATTTATAATGATGCCAAGAGCTTCAGTTTCAGCTAAACGTATACTTGAAGTATTAAATACAAAG
GAAAGTATAGTTGATGGAGATGGAAAATTTGAAAAGACTTCAAAAACTGGTGAAATAGAATTCAAAAATGTTAGCTTTAA
ATATCCTGACTCAGAAGGTTCAGACTATGTACTTCGTGATATAAGCTTTACGGCTAAAATGGGTGAAACAGTTGCCATAA
TTGGATCTACAGGAAGTGGTAAAACTTCTTTAATAAATTTAATACCAAGATTTTATGATGCTACAGAAGGTGAAGTATTA
GTAAATGGAGTTAATGTAAAAAAATATAAACAAAAGGAGCTAAACAATCTTTTAGGATACGTTCATCAAAAGGCAGTGTT
ATTTTCTGGAGATATAACTTCAAACGTAGCTTATGGTAATAATGGCAAGGAAAATTATTCTGAGTTAGACGTGAAAAGAG
CTGTGAAAATAGCCCAAGGAACAGAATTTGTTGAGAATATGGAGAACACTTACAAAGCAAGTATTTCTCAAGGAGGAAGT
AACGTATCAGGAGGGCAAAAGCAAAGATTATCCATAGCAAGAGCAATATGTAGAAAGCCAGAAATATATATATTTGACGA
TTCTTTCTCAGCACTTGACTATAAAACTGACAGAAAACTTAGATCTGTATTAAAACATGAAATATCTAATGCTACAAATT
TAATAGTAGCACAACGTATAGGTACTATAATTGATGCAGACAAAATAATAGTTCTAGATGAAGGACAAATAGCAGGTATG
GGAACTCACCATGAACTTATGAAAAAATGTGGAGTCTATCAAGAAATAGCATATTCTCAGCTTTCAAAGGAGGAATTAGC
CAATGCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(19-293)

ABC transporter (ABC_tran)

(358-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.248

100

0.523