Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NW957_RS13000 Genome accession   NZ_CP102977
Coordinates   2626737..2627402 (-) Length   221 a.a.
NCBI ID   WP_165468984.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 27-G-H     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2621737..2632402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW957_RS12980 (NW957_12980) - 2622204..2622317 (-) 114 WP_011447078.1 hypothetical protein -
  NW957_RS12985 (NW957_12985) - 2622978..2624978 (-) 2001 WP_165468985.1 ABC transporter permease -
  NW957_RS12990 (NW957_12990) - 2624975..2625730 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  NW957_RS12995 (NW957_12995) braS 2625839..2626726 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  NW957_RS13000 (NW957_13000) braR 2626737..2627402 (-) 666 WP_165468984.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  NW957_RS13005 (NW957_13005) - 2627428..2627628 (-) 201 WP_000604727.1 hypothetical protein -
  NW957_RS13010 (NW957_13010) - 2627826..2629250 (+) 1425 WP_000953744.1 alkaline phosphatase -
  NW957_RS13505 - 2629310..2629411 (-) 102 WP_000731976.1 SE2200 family small protein -
  NW957_RS13020 (NW957_13020) - 2629533..2629988 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  NW957_RS13025 (NW957_13025) - 2630233..2630994 (-) 762 WP_000323441.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25422.48 Da        Isoelectric Point: 4.7961

>NTDB_id=721061 NW957_RS13000 WP_165468984.1 2626737..2627402(-) (braR) [Staphylococcus aureus strain 27-G-H]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKFQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=721061 NW957_RS13000 WP_165468984.1 2626737..2627402(-) (braR) [Staphylococcus aureus strain 27-G-H]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATATTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAATTTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-106)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991