Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   PUW52_RS10610 Genome accession   NZ_CP118078
Coordinates   2082341..2082487 (-) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain VSI16     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 2077341..2087487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW52_RS10600 (PUW52_10600) comE 2080249..2080998 (-) 750 WP_022526721.1 competence system response regulator transcription factor ComE Regulator
  PUW52_RS10605 (PUW52_10605) comD/comD2 2080998..2082323 (-) 1326 WP_274984617.1 GHKL domain-containing protein Regulator
  PUW52_RS10610 (PUW52_10610) comC 2082341..2082487 (-) 147 WP_003029519.1 bacteriocin Regulator
  PUW52_RS10620 (PUW52_10620) rlmH 2082769..2083248 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PUW52_RS10625 (PUW52_10625) htrA 2083442..2084632 (+) 1191 WP_070812015.1 trypsin-like peptidase domain-containing protein Regulator
  PUW52_RS10630 (PUW52_10630) spo0J 2084687..2085454 (+) 768 WP_274984540.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=721052 PUW52_RS10610 WP_003029519.1 2082341..2082487(-) (comC) [Streptococcus anginosus strain VSI16]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=721052 PUW52_RS10610 WP_003029519.1 2082341..2082487(-) (comC) [Streptococcus anginosus strain VSI16]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396