Detailed information NTG0721049

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: PUW52_RS10550
• Genome accession: NZ_CP118078
• Coordinates: 2069308..2070405 (+)
• Length: 365 a.a.
• NCBI ID: WP_024052485.1
• Uniprot ID: A0A412PLG7
• Organism: Streptococcus anginosus strain VSI16
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2064308..2075405

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUW52_RS10525 (PUW52_10525)	pgsA	2064778..2065317 (-)	540	WP_024052490.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
PUW52_RS10530 (PUW52_10530)	rodZ	2065328..2066149 (-)	822	WP_024052489.1	cytoskeleton protein RodZ	-
PUW52_RS10535 (PUW52_10535)	-	2066208..2067503 (-)	1296	WP_024052488.1	pitrilysin family protein	-
PUW52_RS10540 (PUW52_10540)	-	2067503..2068750 (-)	1248	WP_338405156.1	pitrilysin family protein	-
PUW52_RS10545 (PUW52_10545)	yaaA	2068926..2069306 (+)	381	WP_024052486.1	S4 domain-containing protein YaaA	-
PUW52_RS10550 (PUW52_10550)	recF	2069308..2070405 (+)	1098	WP_024052485.1	DNA replication/repair protein RecF	Machinery gene
PUW52_RS10555 (PUW52_10555)	guaB	2070494..2071975 (-)	1482	WP_003026802.1	IMP dehydrogenase	-
PUW52_RS10560 (PUW52_10560)	trpS	2072106..2073131 (-)	1026	WP_024052484.1	tryptophan--tRNA ligase	-
PUW52_RS10565 (PUW52_10565)	galE	2073213..2074208 (-)	996	WP_024052483.1	UDP-glucose 4-epimerase GalE	-
PUW52_RS10570 (PUW52_10570)	-	2074229..2074918 (-)	690	WP_024052482.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41978.19 Da
• Isoelectric Point: 8.0527

>NTDB_id=721049 PUW52_RS10550 WP_024052485.1 2069308..2070405(+) (recF) [Streptococcus anginosus strain VSI16]
MWLKNLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGN
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVVLFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTMDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENVTIKYCSSVPLSDSNNLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQNMPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=721049 PUW52_RS10550 WP_024052485.1 2069308..2070405(+) (recF) [Streptococcus anginosus strain VSI16]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAATGCTCAAGGAAAAACAAATATCTTGGAAGCTATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGATACCCTGAAAATATCTGGACAACTTGTTAAGCAAACTGGAAAT
ATTTCTTTGGAAATTGACTTGACACCTAAAGGAAGAATTACAAAAGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTGTTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAACCAATCTATTTATCTGATTTATCACATTACCACCATGTCTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATGGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTAGAGTTTGGTTG
TCGTGTTATGCAGCATAGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGTCAACAAAAACATTTGGAACTCTCAAGTC
ATTTAGAAAACGTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAATTTAAAAGAATCTTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGCGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAACATGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGACATCTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A412PLG7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.626	98.082	0.712
recF	Bacillus subtilis subsp. subtilis str. 168	47.414	95.342	0.452