Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NW957_RS04435 Genome accession   NZ_CP102977
Coordinates   923667..924653 (+) Length   328 a.a.
NCBI ID   WP_165468727.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 27-G-H     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 918667..929653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW957_RS04410 (NW957_04410) opp4B 918880..919842 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  NW957_RS04415 (NW957_04415) opp4C 919854..920735 (+) 882 WP_165468728.1 oligopeptide ABC transporter permease -
  NW957_RS04420 (NW957_04420) trpS 920777..921766 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  NW957_RS04425 (NW957_04425) spxA 922061..922456 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  NW957_RS04430 (NW957_04430) mecA 922827..923546 (+) 720 WP_001217728.1 adaptor protein MecA -
  NW957_RS04435 (NW957_04435) coiA 923667..924653 (+) 987 WP_165468727.1 competence protein CoiA family protein Machinery gene
  NW957_RS04440 (NW957_04440) pepF 924701..926509 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  NW957_RS04445 (NW957_04445) yjbH 926969..927775 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  NW957_RS04450 (NW957_04450) - 927798..928163 (-) 366 WP_000214068.1 truncated hemoglobin YjbI -
  NW957_RS04455 (NW957_04455) - 928267..928860 (-) 594 WP_000224622.1 CYTH domain-containing protein -
  NW957_RS04460 (NW957_04460) - 929046..929393 (+) 348 WP_165468725.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38821.43 Da        Isoelectric Point: 9.5881

>NTDB_id=721030 NW957_RS04435 WP_165468727.1 923667..924653(+) (coiA) [Staphylococcus aureus strain 27-G-H]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=721030 NW957_RS04435 WP_165468727.1 923667..924653(+) (coiA) [Staphylococcus aureus strain 27-G-H]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

98.476

100

0.985
  coiA Staphylococcus aureus MW2

98.476

100

0.985