Detailed information NTG0720940

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: PUW49_RS10850
• Genome accession: NZ_CP118054
• Coordinates: 2121953..2123050 (+)
• Length: 365 a.a.
• NCBI ID: WP_024052485.1
• Uniprot ID: A0A412PLG7
• Organism: Streptococcus anginosus strain VSI37
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2116953..2128050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUW49_RS10825 (PUW49_10825)	pgsA	2117423..2117962 (-)	540	WP_024052490.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
PUW49_RS10830 (PUW49_10830)	rodZ	2117973..2118794 (-)	822	WP_274994646.1	cytoskeleton protein RodZ	-
PUW49_RS10835 (PUW49_10835)	-	2118853..2120148 (-)	1296	WP_024052488.1	pitrilysin family protein	-
PUW49_RS10840 (PUW49_10840)	-	2120148..2121395 (-)	1248	WP_024052487.1	pitrilysin family protein	-
PUW49_RS10845 (PUW49_10845)	yaaA	2121571..2121951 (+)	381	WP_024052486.1	S4 domain-containing protein YaaA	-
PUW49_RS10850 (PUW49_10850)	recF	2121953..2123050 (+)	1098	WP_024052485.1	DNA replication/repair protein RecF	Machinery gene
PUW49_RS10855 (PUW49_10855)	guaB	2123139..2124620 (-)	1482	WP_003026802.1	IMP dehydrogenase	-
PUW49_RS10860 (PUW49_10860)	trpS	2124751..2125776 (-)	1026	WP_274994650.1	tryptophan--tRNA ligase	-
PUW49_RS10865 (PUW49_10865)	galE	2125858..2126853 (-)	996	WP_024052483.1	UDP-glucose 4-epimerase GalE	-
PUW49_RS10870 (PUW49_10870)	-	2126874..2127563 (-)	690	WP_024052482.1	triose-phosphate isomerase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41978.19 Da
• Isoelectric Point: 8.0527

>NTDB_id=720940 PUW49_RS10850 WP_024052485.1 2121953..2123050(+) (recF) [Streptococcus anginosus strain VSI37]
MWLKNLQIQHFRNYEATEIDFHSGLNIFLGQNAQGKTNILEAIYFLALTRSHRTRSDKDLIYFSKDTLKISGQLVKQTGN
ISLEIDLTPKGRITKVNHLKQSKLSDYVGNMNVVLFAPEDLQLIKGAPALRRKFIDIELGQIKPIYLSDLSHYHHVLKQR
NTYLKTAKTMDETFLAVLDDQLVEFGCRVMQHRIEFLKKLEHFGQQKHLELSSHLENVTIKYCSSVPLSDSNNLKESFQI
ALKQSRSRDLFKKNTGVGPHRDDIAFYINDMNANFGSQGQHRSVVLSLKLAEIELMETVTKEKPILLLDDVMSELDNSRQ
LNLLETISQNIQTFMTTTTLEHLQNMPSNIKIFSIHEGHLTEDKV

Nucleotide

• Length: 1098 bp

>NTDB_id=720940 PUW49_RS10850 WP_024052485.1 2121953..2123050(+) (recF) [Streptococcus anginosus strain VSI37]
ATGTGGTTAAAAAACTTACAAATTCAACATTTTCGTAATTATGAAGCAACTGAAATAGATTTTCATTCTGGTCTCAATAT
TTTTCTAGGCCAAAATGCTCAAGGAAAAACAAATATCTTGGAAGCTATCTATTTTCTTGCATTGACACGAAGTCATCGAA
CTCGTTCAGACAAAGATTTAATTTATTTCTCCAAAGATACCCTGAAAATATCTGGACAACTTGTTAAGCAAACTGGAAAT
ATTTCTTTGGAAATTGACTTGACACCTAAAGGAAGAATTACAAAAGTTAATCATCTAAAACAAAGCAAACTATCTGATTA
TGTTGGAAATATGAATGTTGTTTTATTTGCTCCAGAAGATTTACAGTTGATTAAAGGAGCTCCAGCCCTTAGACGAAAAT
TTATTGATATAGAATTGGGGCAAATTAAACCAATCTATTTATCTGATTTATCACATTACCACCATGTCTTAAAACAAAGA
AATACTTATTTAAAAACAGCAAAAACAATGGATGAGACTTTTTTAGCAGTTTTAGATGATCAACTAGTAGAGTTTGGTTG
TCGTGTTATGCAGCATAGGATAGAATTTCTCAAAAAATTAGAGCACTTTGGTCAACAAAAACATTTGGAACTCTCAAGTC
ATTTAGAAAACGTAACCATTAAGTACTGCTCTTCTGTTCCACTTTCAGATTCCAATAATTTAAAAGAATCTTTCCAAATT
GCATTAAAGCAAAGCCGTAGTAGAGATTTATTTAAAAAAAATACTGGAGTTGGTCCCCATCGAGATGATATTGCTTTTTA
TATCAATGACATGAATGCCAATTTTGGTAGTCAAGGACAACATCGAAGCGTGGTTTTATCTCTCAAACTGGCAGAAATTG
AGCTCATGGAAACTGTTACTAAAGAAAAACCAATTCTTCTACTTGACGATGTTATGAGTGAACTTGACAATAGTCGTCAA
CTTAATTTACTTGAAACTATTTCTCAAAATATCCAAACATTTATGACAACAACAACTCTAGAACATCTACAAAACATGCC
TTCTAATATTAAAATTTTCTCAATTCATGAAGGACATCTAACTGAAGACAAGGTGTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A412PLG7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	72.626	98.082	0.712
recF	Bacillus subtilis subsp. subtilis str. 168	47.414	95.342	0.452