Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   PUW71_RS10050 Genome accession   NZ_CP118053
Coordinates   1953497..1953643 (-) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain VSI40     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 1948497..1958643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW71_RS10035 (PUW71_10035) comE 1950085..1950834 (-) 750 WP_024052478.1 competence system response regulator transcription factor ComE Regulator
  PUW71_RS10040 (PUW71_10040) - 1950834..1951922 (-) 1089 Protein_1937 GHKL domain-containing protein -
  PUW71_RS10045 (PUW71_10045) - 1951970..1953145 (-) 1176 WP_070811584.1 IS256-like element ISSag11 family transposase -
  PUW71_RS10050 (PUW71_10050) comC 1953497..1953643 (-) 147 WP_003029519.1 bacteriocin Regulator
  PUW71_RS10060 (PUW71_10060) rlmH 1953925..1954404 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PUW71_RS10065 (PUW71_10065) htrA 1954598..1955788 (+) 1191 WP_024052475.1 trypsin-like peptidase domain-containing protein Regulator
  PUW71_RS10070 (PUW71_10070) spo0J 1955843..1956610 (+) 768 WP_070672281.1 ParB/RepB/Spo0J family partition protein Regulator
  PUW71_RS10075 (PUW71_10075) - 1956908..1958083 (+) 1176 WP_070811584.1 IS256-like element ISSag11 family transposase -

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=720834 PUW71_RS10050 WP_003029519.1 1953497..1953643(-) (comC) [Streptococcus anginosus strain VSI40]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=720834 PUW71_RS10050 WP_003029519.1 1953497..1953643(-) (comC) [Streptococcus anginosus strain VSI40]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396