Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   PUW62_RS04570 Genome accession   NZ_CP118046
Coordinates   927616..928359 (+) Length   247 a.a.
NCBI ID   WP_070241647.1    Uniprot ID   A0AAW5TG40
Organism   Streptococcus anginosus strain VSI52     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 922616..933359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW62_RS04555 (PUW62_04555) - 923872..924831 (+) 960 WP_070241649.1 CPBP family intramembrane glutamic endopeptidase -
  PUW62_RS04560 (PUW62_04560) uvrB 924922..926910 (+) 1989 WP_024052272.1 excinuclease ABC subunit UvrB Machinery gene
  PUW62_RS04565 (PUW62_04565) - 926941..927486 (+) 546 WP_070241648.1 DUF1697 domain-containing protein -
  PUW62_RS04570 (PUW62_04570) pptA 927616..928359 (+) 744 WP_070241647.1 ABC transporter ATP-binding protein Regulator
  PUW62_RS04575 (PUW62_04575) - 928349..929989 (+) 1641 WP_070241646.1 hypothetical protein -
  PUW62_RS04580 (PUW62_04580) hemW 930115..931245 (+) 1131 WP_024052268.1 radical SAM family heme chaperone HemW -
  PUW62_RS04585 (PUW62_04585) - 931249..931980 (+) 732 WP_024052267.1 acyl-[acyl-carrier-protein] thioesterase -
  PUW62_RS04590 (PUW62_04590) - 932003..932776 (+) 774 WP_024052266.1 TIGR01457 family HAD-type hydrolase -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27770.74 Da        Isoelectric Point: 4.8417

>NTDB_id=720677 PUW62_RS04570 WP_070241647.1 927616..928359(+) (pptA) [Streptococcus anginosus strain VSI52]
MIEFKDVTKVYDDKIALNHLNLTLQSGEIVGLIGHNGAGKSTTIKSLVSVINPTHGQIFVDGKELAANRLEIKKKIGYVA
DSPDLFLRLTANEFWELVGTSYDMSLSDYEKRLTELLELFDFTAHRYEVIESFSHGMRQKVFIIGALLSDPDIWVLDEPL
TGLDPQAAFDLKQMMREHADKGNTVLFSTHVLEVAEQLCDRIAILKKGELLFYGTIEELKSQHPEKSLESIYLSLAGRRE
EVSPDAS

Nucleotide


Download         Length: 744 bp        

>NTDB_id=720677 PUW62_RS04570 WP_070241647.1 927616..928359(+) (pptA) [Streptococcus anginosus strain VSI52]
ATGATTGAATTTAAGGATGTTACAAAAGTGTACGATGACAAGATAGCGTTAAATCATCTGAATTTAACGCTTCAGAGTGG
AGAAATTGTAGGATTAATTGGACACAATGGTGCTGGAAAATCAACAACGATTAAATCATTGGTTAGTGTGATTAATCCAA
CGCATGGTCAGATTTTTGTGGATGGCAAGGAATTAGCAGCTAATCGGTTGGAAATCAAGAAGAAAATTGGTTATGTAGCT
GATTCGCCGGACTTGTTTTTACGCCTGACGGCAAATGAATTCTGGGAATTGGTTGGAACTTCTTATGATATGAGTCTTTC
AGATTATGAGAAACGTTTAACAGAGCTACTGGAATTATTTGATTTTACAGCTCATCGCTATGAAGTTATTGAATCGTTTT
CACATGGAATGCGACAAAAAGTGTTTATCATTGGTGCTCTTTTGTCTGATCCAGATATCTGGGTGTTGGATGAGCCTTTA
ACTGGTTTGGATCCGCAGGCGGCTTTTGACCTCAAACAAATGATGCGAGAGCATGCAGATAAAGGAAATACTGTTTTGTT
CTCAACCCATGTTTTAGAAGTGGCAGAGCAATTGTGTGACCGTATTGCCATTCTCAAAAAGGGAGAATTGTTGTTTTACG
GTACGATTGAGGAATTGAAAAGTCAACATCCTGAAAAATCCTTAGAAAGTATTTACCTCAGTTTGGCAGGTCGTAGAGAA
GAGGTGAGTCCTGATGCGTCTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AAW5TG40

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

38.655

96.356

0.372
  pptA Streptococcus thermophilus LMD-9

38.397

95.951

0.368