Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NW971_RS04370 Genome accession   NZ_CP102962
Coordinates   916540..917526 (+) Length   328 a.a.
NCBI ID   WP_258464850.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 16CS0212     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 911540..922526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW971_RS04345 (NW971_04345) opp4B 911752..912714 (+) 963 WP_000593417.1 oligopeptide ABC transporter permease -
  NW971_RS04350 (NW971_04350) opp4C 912726..913607 (+) 882 WP_001180264.1 oligopeptide ABC transporter permease -
  NW971_RS04355 (NW971_04355) trpS 913649..914638 (-) 990 WP_111762126.1 tryptophan--tRNA ligase -
  NW971_RS04360 (NW971_04360) spxA 914933..915328 (+) 396 WP_258464849.1 transcriptional regulator SpxA -
  NW971_RS04365 (NW971_04365) mecA 915699..916418 (+) 720 WP_111762127.1 adaptor protein MecA -
  NW971_RS04370 (NW971_04370) coiA 916540..917526 (+) 987 WP_258464850.1 competence protein CoiA family protein Machinery gene
  NW971_RS04375 (NW971_04375) pepF 917574..919382 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  NW971_RS04380 (NW971_04380) yjbH 919842..920648 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  NW971_RS04385 (NW971_04385) - 920671..921036 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  NW971_RS04390 (NW971_04390) - 921140..921733 (-) 594 WP_000224622.1 CYTH domain-containing protein -
  NW971_RS04395 (NW971_04395) - 921919..922266 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38717.26 Da        Isoelectric Point: 9.6486

>NTDB_id=720614 NW971_RS04370 WP_258464850.1 916540..917526(+) (coiA) [Staphylococcus aureus strain 16CS0212]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKKIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLESDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=720614 NW971_RS04370 WP_258464850.1 916540..917526(+) (coiA) [Staphylococcus aureus strain 16CS0212]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAAAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAGATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGAAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963
  coiA Staphylococcus aureus MW2

96.341

100

0.963