Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NW979_RS12915 Genome accession   NZ_CP102959
Coordinates   2647117..2647782 (-) Length   221 a.a.
NCBI ID   WP_000697879.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 12-G-51     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2642117..2652782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW979_RS12895 (NW979_12895) - 2642587..2642700 (-) 114 WP_011447078.1 hypothetical protein -
  NW979_RS12900 (NW979_12900) - 2643359..2645359 (-) 2001 WP_071008756.1 ABC transporter permease -
  NW979_RS12905 (NW979_12905) - 2645356..2646111 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  NW979_RS12910 (NW979_12910) braS 2646219..2647106 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  NW979_RS12915 (NW979_12915) braR 2647117..2647782 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  NW979_RS12920 (NW979_12920) - 2647808..2648008 (-) 201 WP_000604727.1 hypothetical protein -
  NW979_RS12925 (NW979_12925) - 2648206..2649630 (+) 1425 WP_258413571.1 alkaline phosphatase -
  NW979_RS13365 - 2649690..2649791 (-) 102 WP_000731976.1 SE2200 family small protein -
  NW979_RS12935 (NW979_12935) - 2649913..2650368 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  NW979_RS12940 (NW979_12940) - 2650613..2651374 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25388.46 Da        Isoelectric Point: 4.7961

>NTDB_id=720521 NW979_RS12915 WP_000697879.1 2647117..2647782(-) (braR) [Staphylococcus aureus strain 12-G-51]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=720521 NW979_RS12915 WP_000697879.1 2647117..2647782(-) (braR) [Staphylococcus aureus strain 12-G-51]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATATTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995