Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   NW969_RS09085 Genome accession   NZ_CP102958
Coordinates   1890805..1891848 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 15-G-54     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1885805..1896848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW969_RS09055 (NW969_09055) - 1886226..1887482 (-) 1257 WP_001793428.1 aminopeptidase -
  NW969_RS09060 (NW969_09060) - 1887485..1887685 (-) 201 WP_000180460.1 DUF1128 family protein -
  NW969_RS09065 (NW969_09065) - 1887832..1888296 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  NW969_RS09070 (NW969_09070) - 1888303..1888578 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  NW969_RS09075 (NW969_09075) - 1888856..1890073 (+) 1218 WP_045158466.1 YihY/virulence factor BrkB family protein -
  NW969_RS09080 (NW969_09080) vraR 1890186..1890815 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  NW969_RS09085 (NW969_09085) vraS 1890805..1891848 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  NW969_RS09090 (NW969_09090) liaF 1891845..1892546 (-) 702 WP_000149068.1 cell wall-active antibiotics response protein LiaF -
  NW969_RS09095 (NW969_09095) - 1892561..1892947 (-) 387 WP_001110179.1 hypothetical protein -
  NW969_RS09100 (NW969_09100) map 1893164..1893922 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  NW969_RS09105 (NW969_09105) - 1894449..1895435 (+) 987 WP_000999713.1 aromatic acid exporter family protein -
  NW969_RS09110 (NW969_09110) - 1895624..1896037 (-) 414 WP_258412606.1 hypothetical protein -
  NW969_RS09115 (NW969_09115) - 1896066..1896174 (-) 109 Protein_1755 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=720474 NW969_RS09085 WP_001017131.1 1890805..1891848(-) (vraS) [Staphylococcus aureus strain 15-G-54]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=720474 NW969_RS09085 WP_001017131.1 1890805..1891848(-) (vraS) [Staphylococcus aureus strain 15-G-54]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTACTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTGCAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1