Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   NW969_RS07360 Genome accession   NZ_CP102958
Coordinates   1566299..1566985 (-) Length   228 a.a.
NCBI ID   WP_072353822.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 15-G-54     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1561299..1571985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW969_RS07340 (NW969_07340) rpsT 1562213..1562464 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  NW969_RS07345 (NW969_07345) holA 1562509..1563483 (-) 975 WP_001282562.1 DNA polymerase III subunit delta -
  NW969_RS07350 (NW969_07350) comEC 1563540..1565741 (-) 2202 WP_258413891.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  NW969_RS07355 (NW969_07355) - 1565746..1566207 (-) 462 WP_000439693.1 ComE operon protein 2 -
  NW969_RS07360 (NW969_07360) comEA 1566299..1566985 (-) 687 WP_072353822.1 ComEA family DNA-binding protein Machinery gene
  NW969_RS07365 (NW969_07365) - 1567025..1567741 (-) 717 WP_000084829.1 class I SAM-dependent methyltransferase -
  NW969_RS07370 (NW969_07370) rsfS 1567744..1568097 (-) 354 WP_001088020.1 ribosome silencing factor -
  NW969_RS07375 (NW969_07375) yqeK 1568098..1568682 (-) 585 WP_001019320.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  NW969_RS07380 (NW969_07380) nadD 1568672..1569241 (-) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  NW969_RS07385 (NW969_07385) yhbY 1569244..1569534 (-) 291 WP_000955231.1 ribosome assembly RNA-binding protein YhbY -
  NW969_RS07390 (NW969_07390) aroE 1569538..1570344 (-) 807 WP_258411176.1 shikimate dehydrogenase -
  NW969_RS07395 (NW969_07395) yqeH 1570358..1571458 (-) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25773.50 Da        Isoelectric Point: 9.6753

>NTDB_id=720465 NW969_RS07360 WP_072353822.1 1566299..1566985(-) (comEA) [Staphylococcus aureus strain 15-G-54]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=720465 NW969_RS07360 WP_072353822.1 1566299..1566985(-) (comEA) [Staphylococcus aureus strain 15-G-54]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

99.561

100

0.996
  comEA Staphylococcus aureus N315

97.807

100

0.978