Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   PUW70_RS10350 Genome accession   NZ_CP118029
Coordinates   2007082..2007228 (-) Length   48 a.a.
NCBI ID   WP_003029519.1    Uniprot ID   O33596
Organism   Streptococcus anginosus strain VSI68     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 2002082..2012228
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW70_RS10340 (PUW70_10340) comE 2004990..2005739 (-) 750 WP_024052478.1 competence system response regulator transcription factor ComE Regulator
  PUW70_RS10345 (PUW70_10345) comD/comD2 2005739..2007064 (-) 1326 WP_207047776.1 GHKL domain-containing protein Regulator
  PUW70_RS10350 (PUW70_10350) comC 2007082..2007228 (-) 147 WP_003029519.1 bacteriocin Regulator
  PUW70_RS10360 (PUW70_10360) rlmH 2007510..2007989 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PUW70_RS10365 (PUW70_10365) htrA 2008183..2009373 (+) 1191 WP_024052475.1 trypsin-like peptidase domain-containing protein Regulator
  PUW70_RS10370 (PUW70_10370) spo0J 2009428..2010195 (+) 768 WP_070672281.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5620.65 Da        Isoelectric Point: 10.1958

>NTDB_id=720424 PUW70_RS10350 WP_003029519.1 2007082..2007228(-) (comC) [Streptococcus anginosus strain VSI68]
MKKLFAKKEVVKKEVVEFKELNDEQLDKIIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=720424 PUW70_RS10350 WP_003029519.1 2007082..2007228(-) (comC) [Streptococcus anginosus strain VSI68]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTAGAATTTAAAGAACTGAATGATGAGCAGTTAGA
TAAAATCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCAAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33596

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

51.351

77.083

0.396