Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NW981_RS04530 Genome accession   NZ_CP102956
Coordinates   942472..943458 (+) Length   328 a.a.
NCBI ID   WP_258410533.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 26-G-G     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 937472..948458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW981_RS04505 (NW981_04505) opp4B 937685..938647 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  NW981_RS04510 (NW981_04510) opp4C 938659..939540 (+) 882 WP_001180274.1 oligopeptide ABC transporter permease -
  NW981_RS04515 (NW981_04515) trpS 939582..940571 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  NW981_RS04520 (NW981_04520) spxA 940866..941261 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  NW981_RS04525 (NW981_04525) mecA 941632..942351 (+) 720 WP_001217728.1 adaptor protein MecA -
  NW981_RS04530 (NW981_04530) coiA 942472..943458 (+) 987 WP_258410533.1 competence protein CoiA family protein Machinery gene
  NW981_RS04535 (NW981_04535) pepF 943506..945314 (+) 1809 WP_216731240.1 oligoendopeptidase F -
  NW981_RS04540 (NW981_04540) yjbH 945774..946580 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  NW981_RS04545 (NW981_04545) - 946603..946968 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  NW981_RS04550 (NW981_04550) - 947072..947665 (-) 594 WP_258410534.1 CYTH domain-containing protein -
  NW981_RS04555 (NW981_04555) - 947852..948199 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38853.41 Da        Isoelectric Point: 9.6529

>NTDB_id=720367 NW981_RS04530 WP_258410533.1 942472..943458(+) (coiA) [Staphylococcus aureus strain 26-G-G]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=720367 NW981_RS04530 WP_258410533.1 942472..943458(+) (coiA) [Staphylococcus aureus strain 26-G-G]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

98.78

100

0.988
  coiA Staphylococcus aureus N315

98.171

100

0.982