Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   NW951_RS04495 Genome accession   NZ_CP102954
Coordinates   935298..936284 (+) Length   328 a.a.
NCBI ID   WP_258411056.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 30-P-10     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 930298..941284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW951_RS04470 (NW951_04470) opp4B 930511..931473 (+) 963 WP_258413302.1 oligopeptide ABC transporter permease -
  NW951_RS04475 (NW951_04475) opp4C 931485..932366 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  NW951_RS04480 (NW951_04480) trpS 932408..933397 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  NW951_RS04485 (NW951_04485) spxA 933692..934087 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  NW951_RS04490 (NW951_04490) mecA 934458..935177 (+) 720 WP_001217728.1 adaptor protein MecA -
  NW951_RS04495 (NW951_04495) coiA 935298..936284 (+) 987 WP_258411056.1 competence protein CoiA family protein Machinery gene
  NW951_RS04500 (NW951_04500) pepF 936332..938140 (+) 1809 WP_258413303.1 oligoendopeptidase F -
  NW951_RS04505 (NW951_04505) yjbH 938600..939406 (-) 807 WP_258413304.1 protease adaptor protein YjbH -
  NW951_RS04510 (NW951_04510) - 939429..939794 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  NW951_RS04515 (NW951_04515) - 939898..940491 (-) 594 WP_258413305.1 CYTH domain-containing protein -
  NW951_RS04520 (NW951_04520) - 940677..941024 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38779.46 Da        Isoelectric Point: 9.6054

>NTDB_id=720285 NW951_RS04495 WP_258411056.1 935298..936284(+) (coiA) [Staphylococcus aureus strain 30-P-10]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKLGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGFIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILL

Nucleotide


Download         Length: 987 bp        

>NTDB_id=720285 NW951_RS04495 WP_258411056.1 935298..936284(+) (coiA) [Staphylococcus aureus strain 30-P-10]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAACTGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTTTATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTGGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTGTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

97.866

100

0.979
  coiA Staphylococcus aureus MW2

97.256

100

0.973