Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PT798_RS06435 Genome accession   NZ_CP117979
Coordinates   1340817..1341536 (+) Length   239 a.a.
NCBI ID   WP_001217723.1    Uniprot ID   -
Organism   Staphylococcus aureus strain B-41012     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1335817..1346536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT798_RS06410 - 1335896..1336876 (+) 981 WP_000427769.1 dipeptide ABC transporter ATP-binding protein -
  PT798_RS06415 opp4B 1336869..1337831 (+) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  PT798_RS06420 opp4C 1337844..1338725 (+) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  PT798_RS06425 trpS 1338767..1339756 (-) 990 WP_031589556.1 tryptophan--tRNA ligase -
  PT798_RS06430 spxA 1340051..1340446 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  PT798_RS06435 mecA 1340817..1341536 (+) 720 WP_001217723.1 adaptor protein MecA Regulator
  PT798_RS06440 coiA 1341657..1342643 (+) 987 WP_000959292.1 competence protein CoiA family protein Machinery gene
  PT798_RS06445 pepF 1342691..1344499 (+) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  PT798_RS06450 yjbH 1344959..1345765 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  PT798_RS06455 - 1345788..1346153 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 28285.17 Da        Isoelectric Point: 4.1548

>NTDB_id=720091 PT798_RS06435 WP_001217723.1 1340817..1341536(+) (mecA) [Staphylococcus aureus strain B-41012]
MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKN
EDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFDQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE

Nucleotide


Download         Length: 720 bp        

>NTDB_id=720091 PT798_RS06435 WP_001217723.1 1340817..1341536(+) (mecA) [Staphylococcus aureus strain B-41012]
ATGAGAATAGAACGAGTAGATGATACAACTGTAAAATTGTTTATAACATATAGCGATATCGAGGCCCGTGGATTTAGTCG
TGAAGATTTATGGACAAATCGCAAACGTGGCGAAGAATTCTTTTGGTCAATGATGGATGAAATTAACGAAGAAGAAGATT
TTGTTGTAGAAGGTCCATTATGGATTCAAGTACATGCCTTTGAAAAAGGTGTCGAAGTCACAATTTCTAAATCTAAAAAT
GAAGATATGATGAATATGTCTGATGATGATGCAACTGATCAATTTGATGAACAAGTTCAAGAATTGTTAGCTCAAACATT
AGAAGGTGAAGATCAATTAGAAGAATTATTCGATCAACGAACAAAAGAAAAAGAAGCTCAAGGTTCTAAACGTCAAAAGT
CTTCAGCACGTAAAAATACAAGAACAATTATTGTGAAATTTAACGATTTAGAAGATGTTATTAATTATGCATATCATAGC
AATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTACATTTTGATAGTCA
TGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATT
TAAATGACTATGCTAAAATAATTATGAGTCATAACGTAACAGCTCAAGTTCGACGTTATTTTCCAGAGACAACTGAATAA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

37.975

99.163

0.377