Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PT746_RS24250 Genome accession   NZ_CP117974
Coordinates   5093208..5093615 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain B-3509     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5088208..5098615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT746_RS24230 pilK 5089140..5090015 (-) 876 WP_004352088.1 type 4 fimbrial methyltransferase PilK -
  PT746_RS24235 pilJ 5090076..5092124 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  PT746_RS24240 - 5092209..5092745 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  PT746_RS24245 pilH 5092796..5093161 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PT746_RS24250 pilG 5093208..5093615 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  PT746_RS24255 gshB 5093870..5094823 (+) 954 WP_003100943.1 glutathione synthase -
  PT746_RS24260 - 5094970..5095863 (+) 894 WP_003084580.1 TonB family protein -
  PT746_RS24265 - 5095912..5096481 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  PT746_RS24270 ruvX 5096481..5096915 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  PT746_RS24275 pyrR 5097027..5097539 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PT746_RS24280 - 5097563..5098567 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=720022 PT746_RS24250 WP_003084583.1 5093208..5093615(-) (pilG) [Pseudomonas aeruginosa strain B-3509]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=720022 PT746_RS24250 WP_003084583.1 5093208..5093615(-) (pilG) [Pseudomonas aeruginosa strain B-3509]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385