Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   MKL45_RS16480 Genome accession   NZ_CP102934
Coordinates   3471906..3472433 (-) Length   175 a.a.
NCBI ID   WP_000695065.1    Uniprot ID   N9K1N5
Organism   Acinetobacter sp. AOR07_HL     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3466906..3477433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKL45_RS16460 (MKL45_16465) - 3467095..3467970 (-) 876 WP_000218801.1 hypothetical protein -
  MKL45_RS16465 (MKL45_16470) aroB 3467986..3469068 (-) 1083 WP_001193997.1 3-dehydroquinate synthase -
  MKL45_RS16470 (MKL45_16475) aroK 3469097..3469666 (-) 570 WP_000643712.1 shikimate kinase AroK -
  MKL45_RS16475 (MKL45_16480) pilQ 3469678..3471843 (-) 2166 WP_002062175.1 type IV pilus secretin PilQ family protein Machinery gene
  MKL45_RS16480 (MKL45_16485) pilP 3471906..3472433 (-) 528 WP_000695065.1 pilus assembly protein PilP Machinery gene
  MKL45_RS16485 (MKL45_16490) pilO 3472444..3473184 (-) 741 WP_000081156.1 type 4a pilus biogenesis protein PilO Machinery gene
  MKL45_RS16490 (MKL45_16495) pilN 3473181..3473822 (-) 642 WP_000201224.1 PilN domain-containing protein Machinery gene
  MKL45_RS16495 (MKL45_16500) pilM 3473822..3474880 (-) 1059 WP_002014066.1 pilus assembly protein PilM Machinery gene

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19419.64 Da        Isoelectric Point: 8.9898

>NTDB_id=719972 MKL45_RS16480 WP_000695065.1 3471906..3472433(-) (pilP) [Acinetobacter sp. AOR07_HL]
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=719972 MKL45_RS16480 WP_000695065.1 3471906..3472433(-) (pilP) [Acinetobacter sp. AOR07_HL]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTAGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTAATCCAAACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9K1N5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

100

100

1
  comL Acinetobacter baylyi ADP1

71.839

99.429

0.714