Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NVB75_RS17995 Genome accession   NZ_CP102929
Coordinates   3924047..3924454 (-) Length   135 a.a.
NCBI ID   WP_003213736.1    Uniprot ID   -
Organism   Pseudomonas sp. CBS     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3919047..3929454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NVB75_RS17980 (NVB75_17980) - 3921061..3923100 (-) 2040 WP_258342633.1 methyl-accepting chemotaxis protein -
  NVB75_RS17985 (NVB75_17985) - 3923097..3923621 (-) 525 WP_177025598.1 chemotaxis protein CheW -
  NVB75_RS17990 (NVB75_17990) pilH 3923634..3923999 (-) 366 WP_017476512.1 twitching motility response regulator PilH -
  NVB75_RS17995 (NVB75_17995) pilG 3924047..3924454 (-) 408 WP_003213736.1 twitching motility response regulator PilG Regulator
  NVB75_RS18000 (NVB75_18000) gshB 3924694..3925647 (+) 954 WP_010167673.1 glutathione synthase -
  NVB75_RS18005 (NVB75_18005) - 3925725..3926624 (+) 900 WP_017476513.1 energy transducer TonB -
  NVB75_RS18010 (NVB75_18010) - 3926815..3927384 (+) 570 WP_258342638.1 YqgE/AlgH family protein -
  NVB75_RS18015 (NVB75_18015) ruvX 3927384..3927821 (+) 438 WP_003213744.1 Holliday junction resolvase RuvX -
  NVB75_RS18020 (NVB75_18020) pyrR 3927996..3928502 (+) 507 WP_167664095.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14868.35 Da        Isoelectric Point: 7.3838

>NTDB_id=719796 NVB75_RS17995 WP_003213736.1 3924047..3924454(-) (pilG) [Pseudomonas sp. CBS]
MEQHSNALKVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALAKIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=719796 NVB75_RS17995 WP_003213736.1 3924047..3924454(-) (pilG) [Pseudomonas sp. CBS]
ATGGAACAGCATTCCAACGCCTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGCCGCACGGCCGAAACACTGTT
GAAGAACGTAGGGTGCGACGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCCAAGATTGTTGACCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGTTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGTTGTCCTCCAAGGATGGTCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGTTCTGATCAATT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAGCGCGATCAAGGCCTATGTACCGGGCTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.8

92.593

0.674
  vicR Streptococcus mutans UA159

40.476

93.333

0.378