Detailed information
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | NWO26_RS06415 | Genome accession | NZ_CP102797 |
| Coordinates | 1261217..1262173 (-) | Length | 318 a.a. |
| NCBI ID | WP_011681684.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain ST057-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1256217..1267173
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NWO26_RS06380 | proC | 1256776..1257546 (+) | 771 | WP_011226616.1 | pyrroline-5-carboxylate reductase | - |
| NWO26_RS06385 | - | 1257576..1258238 (-) | 663 | WP_011681679.1 | CPBP family intramembrane glutamic endopeptidase | - |
| NWO26_RS06390 | - | 1258335..1258778 (-) | 444 | WP_113870473.1 | CAAX protease | - |
| NWO26_RS06395 | - | 1258852..1259190 (-) | 339 | WP_224103197.1 | CPBP family intramembrane glutamic endopeptidase | - |
| NWO26_RS06400 | - | 1259234..1259509 (-) | 276 | WP_011681681.1 | hypothetical protein | - |
| NWO26_RS06405 | - | 1259521..1259719 (-) | 199 | Protein_1263 | helix-turn-helix transcriptional regulator | - |
| NWO26_RS06410 | - | 1259968..1261161 (-) | 1194 | WP_014608740.1 | acetate kinase | - |
| NWO26_RS06415 | comYH | 1261217..1262173 (-) | 957 | WP_011681684.1 | class I SAM-dependent methyltransferase | Machinery gene |
| NWO26_RS06420 | comGG | 1262218..1262535 (-) | 318 | WP_011681685.1 | competence type IV pilus minor pilin ComGG | - |
| NWO26_RS06425 | comYF | 1262513..1262950 (-) | 438 | WP_011681686.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| NWO26_RS06430 | comGE | 1262934..1263227 (-) | 294 | WP_011226625.1 | competence type IV pilus minor pilin ComGE | - |
| NWO26_RS06435 | comYD | 1263199..1263627 (-) | 429 | WP_011226626.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NWO26_RS06440 | comYC | 1263587..1263913 (-) | 327 | WP_002946126.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NWO26_RS06445 | comYB | 1263910..1265010 (-) | 1101 | WP_120764773.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| NWO26_RS06450 | comGA/cglA/cilD | 1264892..1265833 (-) | 942 | WP_014608745.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NWO26_RS06455 | - | 1265914..1266276 (-) | 363 | WP_014608746.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35843.02 Da Isoelectric Point: 4.7891
>NTDB_id=719032 NWO26_RS06415 WP_011681684.1 1261217..1262173(-) (comYH) [Streptococcus thermophilus strain ST057-1]
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANELIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTQEKQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIAEVVNSV
AVYIQGDAVRPHILKESNVIISDLPIGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAIFLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTKNAPETFVYPLSDLKNPRVLKDFTENFQKWKSDNSIF
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANELIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTQEKQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIAEVVNSV
AVYIQGDAVRPHILKESNVIISDLPIGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAIFLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTKNAPETFVYPLSDLKNPRVLKDFTENFQKWKSDNSIF
Nucleotide
Download Length: 957 bp
>NTDB_id=719032 NWO26_RS06415 WP_011681684.1 1261217..1262173(-) (comYH) [Streptococcus thermophilus strain ST057-1]
ATGAATTTTGAAGCAATTGAGACAGCTTTTGAGCTGTTGTTAGAAAATGTCCAAACTATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCACTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTTGCTAATGAGCTCATCATCAAAAACAATG
AGAAATTACGGGCGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTTTTGTTTATCAAACTAGGGCAATTG
GAAGCTTTACAAGCCAATCACCAATTTACACCAGATGCTATCGGATTTATCATTCTGTACTTGCTCGAAGGTTTGACCCA
GGAAAAACAATTAGATATCTTGGAGATTGGTTCGGGAACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGGATGGAAGTTGATGATCTTCTTATCGATTTGTCAGCTAGTATTGCTGAGGTGGTGAATTCAGTA
GCGGTTTATATCCAAGGGGATGCTGTTCGACCACATATTCTCAAAGAGAGCAACGTTATTATCAGCGATTTACCTATAGG
TTACTACCCTAATGATGAGATTGCGAGTCGTTTCAAGGTGGCAGCAACTGGCGAACACACTTATGCCCATCATCTTCTTA
TGGAGCAATCGCTTAAGTATTTGAAGAAAGATGGTATTGCTATTTTTTTGGCACCAACCAATCTTTTGACAAGCCCTCAA
AGTGATCTGCTTAAGAAGTGGTTATCAGGATATGCTGATATTATTGCTGTTATTACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAACATGAAGTCTATCTTTGTGCTAAAAAAACAAACTAAAAATGCTCCTGAGACCTTCGTTTACCCACTTAGCG
ATTTGAAAAATCCAAGGGTCCTCAAGGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
ATGAATTTTGAAGCAATTGAGACAGCTTTTGAGCTGTTGTTAGAAAATGTCCAAACTATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCACTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTTGCTAATGAGCTCATCATCAAAAACAATG
AGAAATTACGGGCGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTTTTGTTTATCAAACTAGGGCAATTG
GAAGCTTTACAAGCCAATCACCAATTTACACCAGATGCTATCGGATTTATCATTCTGTACTTGCTCGAAGGTTTGACCCA
GGAAAAACAATTAGATATCTTGGAGATTGGTTCGGGAACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGGATGGAAGTTGATGATCTTCTTATCGATTTGTCAGCTAGTATTGCTGAGGTGGTGAATTCAGTA
GCGGTTTATATCCAAGGGGATGCTGTTCGACCACATATTCTCAAAGAGAGCAACGTTATTATCAGCGATTTACCTATAGG
TTACTACCCTAATGATGAGATTGCGAGTCGTTTCAAGGTGGCAGCAACTGGCGAACACACTTATGCCCATCATCTTCTTA
TGGAGCAATCGCTTAAGTATTTGAAGAAAGATGGTATTGCTATTTTTTTGGCACCAACCAATCTTTTGACAAGCCCTCAA
AGTGATCTGCTTAAGAAGTGGTTATCAGGATATGCTGATATTATTGCTGTTATTACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAACATGAAGTCTATCTTTGTGCTAAAAAAACAAACTAAAAATGCTCCTGAGACCTTCGTTTACCCACTTAGCG
ATTTGAAAAATCCAAGGGTCCTCAAGGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
68.889 |
99.057 |
0.682 |
| comYH | Streptococcus mutans UA140 |
68.889 |
99.057 |
0.682 |