Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PTC91_RS02090 Genome accession   NZ_CP117749
Coordinates   440352..440759 (+) Length   135 a.a.
NCBI ID   WP_134278629.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain 2022CK-00828     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 435352..445759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PTC91_RS02060 (PTC91_02060) - 435400..436404 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  PTC91_RS02065 (PTC91_02065) pyrR 436428..436940 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PTC91_RS02070 (PTC91_02070) ruvX 437052..437486 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  PTC91_RS02075 (PTC91_02075) - 437486..438055 (-) 570 WP_003084577.1 YqgE/AlgH family protein -
  PTC91_RS02080 (PTC91_02080) - 438104..438997 (-) 894 WP_003084580.1 TonB family protein -
  PTC91_RS02085 (PTC91_02085) gshB 439144..440097 (-) 954 WP_003100943.1 glutathione synthase -
  PTC91_RS02090 (PTC91_02090) pilG 440352..440759 (+) 408 WP_134278629.1 twitching motility response regulator PilG Regulator
  PTC91_RS02095 (PTC91_02095) pilH 440806..441171 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PTC91_RS02100 (PTC91_02100) - 441222..441758 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  PTC91_RS02105 (PTC91_02105) pilJ 441843..443891 (+) 2049 WP_057381665.1 chemotaxis chemoreceptor PilJ -
  PTC91_RS02110 (PTC91_02110) pilK 443952..444827 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14658.08 Da        Isoelectric Point: 7.1071

>NTDB_id=718901 PTC91_RS02090 WP_134278629.1 440352..440759(+) (pilG) [Pseudomonas aeruginosa strain 2022CK-00828]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQCLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=718901 PTC91_RS02090 WP_134278629.1 440352..440759(+) (pilG) [Pseudomonas aeruginosa strain 2022CK-00828]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTG
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.016

94.074

0.696
  vicR Streptococcus mutans UA159

43.59

86.667

0.378