Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NWE22_RS10300 Genome accession   NZ_CP102747
Coordinates   2014439..2015197 (+) Length   252 a.a.
NCBI ID   WP_239604381.1    Uniprot ID   -
Organism   Streptococcus parasuis strain SFJ45     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2009439..2020197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NWE22_RS10285 (NWE22_10285) - 2011833..2012495 (-) 663 WP_239604379.1 YoaK family protein -
  NWE22_RS10290 (NWE22_10290) rlmH 2012523..2013002 (-) 480 WP_239604380.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NWE22_RS10295 (NWE22_10295) htrA 2013195..2014376 (+) 1182 WP_171989296.1 trypsin-like peptidase domain-containing protein Regulator
  NWE22_RS10300 (NWE22_10300) spo0J 2014439..2015197 (+) 759 WP_239604381.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28968.45 Da        Isoelectric Point: 9.8174

>NTDB_id=718725 NWE22_RS10300 WP_239604381.1 2014439..2015197(+) (spo0J) [Streptococcus parasuis strain SFJ45]
MEELHYLKIKDIQANPYQPRLHFDEEKLLELAQSIKENGVIQPIIVRRSPLIGFELLAGERRLRASQLAGLTEIPAVIKH
LSDDDLLYQAIIENLQRSDLNPIEEAHSYEKLIKKGLTHDEIAQIMGKSRPYITNLLRLLHLSESTRQAVETGKITQGHA
RQLVALSERQQAEWVQKIQKKDISVRQLETILSSKKKKTIRKSNQFVAEEEEKLAKLLGTKVTIQQKKNGSGQLTIQFQN
IEEFERIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=718725 NWE22_RS10300 WP_239604381.1 2014439..2015197(+) (spo0J) [Streptococcus parasuis strain SFJ45]
ATGGAAGAACTACACTATCTCAAAATAAAAGACATTCAGGCCAATCCCTATCAACCAAGATTGCATTTTGATGAAGAAAA
ATTATTGGAATTAGCTCAATCTATCAAAGAAAATGGCGTCATTCAACCTATTATTGTTCGCAGATCACCGCTGATTGGTT
TTGAGTTACTTGCTGGTGAAAGACGATTAAGAGCTAGTCAACTAGCGGGATTAACAGAGATTCCAGCAGTCATCAAGCAT
CTATCTGATGATGATTTACTCTACCAAGCTATCATAGAAAACTTACAACGCTCTGACCTCAATCCTATTGAAGAGGCTCA
TTCCTACGAAAAGTTGATAAAAAAAGGCTTAACACATGATGAGATTGCCCAAATCATGGGAAAATCACGACCATATATCA
CTAATCTTCTTCGTTTACTCCATTTATCCGAATCTACGAGGCAAGCAGTAGAAACAGGAAAAATCACACAAGGGCATGCT
AGACAGCTAGTAGCACTATCAGAGAGACAACAAGCAGAATGGGTTCAAAAAATCCAAAAAAAGGATATCAGCGTACGACA
GTTAGAAACAATACTATCCTCTAAAAAGAAAAAAACAATTAGAAAATCCAACCAATTTGTTGCAGAAGAAGAAGAGAAAT
TAGCAAAACTACTTGGAACCAAGGTAACAATCCAACAAAAGAAAAATGGATCGGGACAACTGACTATTCAATTTCAAAAC
ATCGAAGAATTTGAAAGAATTATCAACAGTCTGAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.941

100

0.552