Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   NHG87_RS06765 Genome accession   NZ_CP102714
Coordinates   1300604..1301875 (-) Length   423 a.a.
NCBI ID   WP_086439858.1    Uniprot ID   -
Organism   Limosilactobacillus fermentum strain DM072     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1295604..1306875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NHG87_RS06760 (NHG87_006760) - 1298849..1300570 (-) 1722 WP_086439857.1 proline--tRNA ligase -
  NHG87_RS06765 (NHG87_006765) eeP 1300604..1301875 (-) 1272 WP_086439858.1 RIP metalloprotease RseP Regulator
  NHG87_RS06770 (NHG87_006770) - 1301897..1302685 (-) 789 WP_252772737.1 phosphatidate cytidylyltransferase -
  NHG87_RS06775 (NHG87_006775) - 1302702..1303475 (-) 774 WP_369708161.1 isoprenyl transferase -
  NHG87_RS06780 (NHG87_006780) frr 1303602..1304162 (-) 561 WP_021815941.1 ribosome recycling factor -
  NHG87_RS06785 (NHG87_006785) pyrH 1304162..1304887 (-) 726 WP_003681954.1 UMP kinase -
  NHG87_RS06790 (NHG87_006790) tsf 1304969..1305847 (-) 879 WP_057195080.1 translation elongation factor Ts -
  NHG87_RS06795 (NHG87_006795) rpsB 1305938..1306717 (-) 780 WP_021815938.1 30S ribosomal protein S2 -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 46217.61 Da        Isoelectric Point: 6.3997

>NTDB_id=718505 NHG87_RS06765 WP_086439858.1 1300604..1301875(-) (eeP) [Limosilactobacillus fermentum strain DM072]
MIITIITFIIVFGILVLVHEFGHYYFAKRAGILVREFSIGMGPKVWWRRSNGTTYTIRILPLGGYVRLAGADEDEDELRP
GTPVTLQTNEEGKVTLINASEKETLLEGIPLRIVDSDLEDKLIISGYENDDEETVKTYPVDHDATIVERDGTEVRIAPKD
VQFQSASLPARMMTNFAGPMNNFILSLLVFIILGFTLSGIPTNSNVLGGVTKDSVAAKAGLVSGDKITRVATTKVSTWND
ISQAISPNPGKKLAVTYQRDGKTYHTTVTPKTTKQGSQTVGMIGIREEEKFDPVARINYGWRQFITAGTLIFAVLGHMIT
HGFSLNDLGGPVAIYAGTSQATSLGINGILAFLAMLSINLGIVNLIPIPALDGGKLLLNIVEGIIRRPIPEKVEGILNLA
GFALLMILMVLVTYNDIQRYFIH

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=718505 NHG87_RS06765 WP_086439858.1 1300604..1301875(-) (eeP) [Limosilactobacillus fermentum strain DM072]
TTGATCATCACCATCATTACTTTTATCATCGTCTTCGGAATCCTGGTGCTCGTTCACGAATTCGGCCACTACTACTTTGC
CAAGCGGGCCGGGATTTTGGTGCGCGAGTTTTCGATCGGGATGGGGCCCAAGGTTTGGTGGCGGCGTTCAAACGGGACGA
CCTACACCATCCGGATCCTGCCGCTCGGGGGCTACGTTCGCCTGGCCGGGGCCGATGAAGATGAAGACGAACTCCGTCCC
GGGACGCCGGTGACCTTGCAAACCAATGAGGAAGGCAAGGTGACCCTGATCAACGCCAGCGAAAAGGAAACCCTGTTGGA
GGGGATTCCGCTGCGGATCGTTGACAGCGACCTGGAGGATAAGTTAATCATCTCCGGGTACGAAAATGATGATGAAGAAA
CCGTCAAGACCTACCCGGTTGATCACGACGCGACGATCGTCGAACGGGACGGGACCGAGGTGCGGATCGCCCCCAAGGAC
GTTCAGTTTCAATCGGCCAGCTTACCGGCGCGGATGATGACCAACTTTGCCGGGCCAATGAACAACTTCATCTTGTCCCT
GCTGGTCTTCATCATCCTGGGCTTTACCCTGAGCGGGATCCCCACCAACTCCAACGTCTTGGGCGGGGTAACCAAGGATT
CGGTGGCTGCTAAGGCCGGCCTGGTGAGCGGCGATAAAATTACCAGGGTGGCGACGACCAAGGTCAGCACCTGGAACGAT
ATTTCCCAGGCAATTTCCCCTAACCCGGGGAAGAAGCTCGCCGTTACCTACCAGCGCGATGGCAAGACCTACCACACCAC
CGTGACGCCTAAGACCACCAAACAGGGGAGCCAAACGGTCGGGATGATCGGGATCAGAGAAGAGGAGAAGTTTGATCCGG
TCGCCCGCATTAACTACGGCTGGCGCCAATTTATCACCGCCGGCACCCTGATCTTTGCGGTGCTCGGCCACATGATTACG
CACGGCTTTAGCTTAAACGACCTGGGGGGGCCGGTGGCAATTTACGCCGGCACCTCACAGGCGACCTCGTTAGGGATTAA
CGGCATCCTCGCCTTCTTGGCGATGCTGTCGATTAACCTAGGGATCGTTAACCTGATTCCGATCCCGGCCTTAGACGGGG
GGAAGCTCCTCTTAAACATTGTCGAAGGCATCATTCGCCGGCCAATTCCCGAAAAAGTGGAGGGGATTTTGAATTTGGCT
GGCTTTGCCCTCTTGATGATCCTGATGGTCCTCGTGACCTATAACGACATTCAACGCTACTTTATCCATTAA

Domains


Predicted by InterproScan.

(209-269)

(7-408)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.113

100

0.482

  eeP Streptococcus thermophilus LMD-9

48.113

100

0.482