Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   PS271_RS15830 Genome accession   NZ_CP117521
Coordinates   3508720..3509844 (-) Length   374 a.a.
NCBI ID   WP_356289684.1    Uniprot ID   -
Organism   Streptomyces sp. SCA2-17     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3503720..3514844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PS271_RS15810 (PS271_15770) - 3505403..3506086 (+) 684 WP_398382493.1 response regulator -
  PS271_RS15815 (PS271_15775) - 3506427..3506915 (+) 489 WP_398382494.1 pyridoxamine 5'-phosphate oxidase -
  PS271_RS15820 (PS271_15780) - 3506947..3507537 (-) 591 WP_398382495.1 phosphatase PAP2 family protein -
  PS271_RS15825 (PS271_15785) - 3507722..3508543 (+) 822 WP_398382496.1 hypothetical protein -
  PS271_RS15830 (PS271_15790) disA 3508720..3509844 (-) 1125 WP_356289684.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  PS271_RS15835 (PS271_15795) radA/sms 3509967..3511418 (-) 1452 WP_398382497.1 DNA repair protein RadA Machinery gene
  PS271_RS15840 (PS271_15800) - 3511773..3513389 (+) 1617 WP_398382498.1 sigma-70 family RNA polymerase sigma factor -
  PS271_RS15845 (PS271_15805) - 3513684..3514493 (-) 810 WP_398382499.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40127.02 Da        Isoelectric Point: 5.0025

>NTDB_id=718283 PS271_RS15830 WP_356289684.1 3508720..3509844(-) (disA) [Streptomyces sp. SCA2-17]
MAANDRASGPGKAGGSSGADGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGMDKTVESMCTGGFVLDVEFSATRLR
ELCKLDGALILDKDITKIVRAGVQLLPDASIPTEETGTRHRTAQRVSIQCGFPVVSVSQSMRLIALYVGGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVCQRLELVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERDLVVRDYVPEPTAKRTRTVPEALSELDSLTHPELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVDHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=718283 PS271_RS15830 WP_356289684.1 3508720..3509844(-) (disA) [Streptomyces sp. SCA2-17]
GTGGCAGCCAACGACCGGGCATCGGGCCCCGGCAAGGCCGGGGGTTCCTCCGGTGCCGACGGTCTGATGCGCGCCTCGCT
GAGCGCCGTCGCGCCCGGCACGGCCTTGCGCGACGGCCTGGAGCGCGTCCTCCGCGGCAATACGGGCGGCCTGATCGTCC
TGGGCATGGACAAGACGGTGGAGTCCATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCAGTGCCACGCGCCTGCGC
GAGCTGTGCAAGCTGGACGGCGCCCTGATCCTCGACAAGGACATCACCAAGATCGTGCGGGCGGGCGTGCAGCTCCTGCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGCAGCGCGTCTCCATCCAGTGCGGCTTCCCCG
TGGTGTCGGTCAGCCAGTCGATGCGCCTGATCGCCCTGTACGTGGGCGGTGAGCGGCGCGTCCTGGAGGAGTCCGGGGCG
ATCCTCTCCCGGGCCAACCAGGCCCTGGCCACCCTGGAGCGCTACAAGCTCCGGCTGGACGAGGTCGCGGGCACCCTCTC
CGCCCTGGAGATCGAGGATCTGGTGACGGTCCGCGACGTGACCGCGGTCTGCCAGCGCCTGGAGCTGGTCCGCCGCATCG
CCACGGAGATCGCGGAGTACGTGGTGGAGCTGGGCACCGACGGCCGCCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCC
GGCGTCGAGCCCGAGCGCGACCTCGTCGTGCGGGACTACGTCCCGGAGCCGACCGCCAAGCGCACCCGCACGGTCCCCGA
GGCCCTGTCCGAGCTGGACTCCCTCACCCACCCCGAGCTGCTCGAACTGCCCATCGTGGCGCGCGCCCTGGGCTACAGCG
GCTCCCCGGAGACGCTGGACTCCGCGGTGTCGCCGCGCGGCTACCGCCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATAGAGCGGCTGGTCGACCACTTCGGCGGCTTGCAGAAGCTGCTGGCCGCCAGCGTGGACGACCTCCAGACGGTCGA
CGGGGTCGGCGAGGCCCGTGCCCGCTCGGTCCGCGAGGGGCTGTCGCGGCTTGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441