Detailed information NTG0718172

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PSR65_RS02490
• Genome accession: NZ_CP117469
• Coordinates: 521060..522085 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain B-ZidR
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 516060..527085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSR65_RS02465 (PSR65_02455)	metJ	516497..516814 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PSR65_RS02470 (PSR65_02460)	yiiX	516998..517606 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
PSR65_RS02475 (PSR65_02465)	-	517613..518236 (+)	624	WP_000720774.1	TIGR02117 family protein	-
PSR65_RS02480 (PSR65_02470)	rpmE	518291..518503 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PSR65_RS02485 (PSR65_02475)	priA	518706..520904 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
PSR65_RS02490 (PSR65_02480)	cytR	521060..522085 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PSR65_RS02495 (PSR65_02485)	ftsN	522177..523136 (+)	960	WP_000068828.1	cell division protein FtsN	-
PSR65_RS02500 (PSR65_02490)	hslV	523229..523759 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PSR65_RS02505 (PSR65_02495)	hslU	523769..525100 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PSR65_RS02510 (PSR65_02500)	menA	525167..526093 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PSR65_RS02515 (PSR65_02505)	rraA	526186..526671 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PSR65_RS02520 (PSR65_02510)	zapB	526756..527001 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=718172 PSR65_RS02490 WP_000644904.1 521060..522085(+) (cytR) [Escherichia coli strain B-ZidR]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=718172 PSR65_RS02490 WP_000644904.1 521060..522085(+) (cytR) [Escherichia coli strain B-ZidR]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628