Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NQZ71_RS08485 | Genome accession | NZ_CP102589 |
| Coordinates | 1734180..1735241 (+) | Length | 353 a.a. |
| NCBI ID | WP_144453374.1 | Uniprot ID | - |
| Organism | Niallia taxi strain NBC_Nia | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1729180..1740241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NQZ71_RS08450 (NQZ71_08470) | - | 1730368..1731477 (+) | 1110 | WP_317011667.1 | hypothetical protein | - |
| NQZ71_RS08455 (NQZ71_08475) | - | 1731564..1731878 (+) | 315 | WP_127737462.1 | MTH1187 family thiamine-binding protein | - |
| NQZ71_RS08460 (NQZ71_08480) | - | 1731901..1732539 (+) | 639 | WP_311200959.1 | MBL fold metallo-hydrolase | - |
| NQZ71_RS08465 (NQZ71_08485) | - | 1732585..1733304 (-) | 720 | WP_144452649.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| NQZ71_RS08475 (NQZ71_08495) | - | 1733651..1733746 (-) | 96 | WP_127737464.1 | YjcZ family sporulation protein | - |
| NQZ71_RS08480 (NQZ71_08500) | - | 1733886..1734020 (-) | 135 | WP_260055392.1 | hypothetical protein | - |
| NQZ71_RS08485 (NQZ71_08505) | comGA | 1734180..1735241 (+) | 1062 | WP_144453374.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NQZ71_RS08490 (NQZ71_08510) | comGB | 1735216..1736268 (+) | 1053 | WP_144452650.1 | competence type IV pilus assembly protein ComGB | - |
| NQZ71_RS08495 (NQZ71_08515) | comGC | 1736280..1736582 (+) | 303 | WP_317011669.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NQZ71_RS08500 (NQZ71_08520) | comGD | 1736579..1737025 (+) | 447 | WP_260055391.1 | competence type IV pilus minor pilin ComGD | - |
| NQZ71_RS08505 (NQZ71_08525) | - | 1737009..1737326 (+) | 318 | WP_144452653.1 | hypothetical protein | - |
| NQZ71_RS08510 (NQZ71_08530) | comGF | 1737280..1737762 (+) | 483 | WP_260055390.1 | competence type IV pilus minor pilin ComGF | - |
| NQZ71_RS08515 (NQZ71_08535) | comGG | 1737759..1738136 (+) | 378 | WP_317011670.1 | competence type IV pilus minor pilin ComGG | - |
| NQZ71_RS08520 (NQZ71_08540) | - | 1738196..1738375 (+) | 180 | WP_144452656.1 | YqzE family protein | - |
| NQZ71_RS08525 (NQZ71_08545) | - | 1738415..1739212 (-) | 798 | WP_127737472.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 353 a.a. Molecular weight: 39321.53 Da Isoelectric Point: 9.5548
>NTDB_id=717935 NQZ71_RS08485 WP_144453374.1 1734180..1735241(+) (comGA) [Niallia taxi strain NBC_Nia]
MISIEALANRLIREAVEANATDIHIVPKKKESHLQFRISHSLHHRMTLPQAQCDRLISHFKFTASMDIGERRRPQSGAIS
TKLNGQDISLRLSTLPATPHESLVIRLLADNSTIPIDKISLFPNTSKKLLSLLKYAHGLVLFTGPTGSGKTSTLYSLLNS
NSHLYKRKVISLEDPIEKPQDNVLQVQVNEKAGITYASGLRAILRHDPDIIMVGEIRDADTARIAVRASLTGHLVLATMH
TRDAKGAIYRLMEFGVSKVDIQQTLIAVTAQRLVELVCPYCSTDCPPFCFSDQHRSKRASVFEILTGKLIQSLLAETYVQ
NLHPKPALKEAIGKGIALGYVKETEYARWIYED
MISIEALANRLIREAVEANATDIHIVPKKKESHLQFRISHSLHHRMTLPQAQCDRLISHFKFTASMDIGERRRPQSGAIS
TKLNGQDISLRLSTLPATPHESLVIRLLADNSTIPIDKISLFPNTSKKLLSLLKYAHGLVLFTGPTGSGKTSTLYSLLNS
NSHLYKRKVISLEDPIEKPQDNVLQVQVNEKAGITYASGLRAILRHDPDIIMVGEIRDADTARIAVRASLTGHLVLATMH
TRDAKGAIYRLMEFGVSKVDIQQTLIAVTAQRLVELVCPYCSTDCPPFCFSDQHRSKRASVFEILTGKLIQSLLAETYVQ
NLHPKPALKEAIGKGIALGYVKETEYARWIYED
Nucleotide
Download Length: 1062 bp
>NTDB_id=717935 NQZ71_RS08485 WP_144453374.1 1734180..1735241(+) (comGA) [Niallia taxi strain NBC_Nia]
TTGATTTCCATTGAAGCTTTAGCAAACCGACTCATAAGGGAGGCTGTTGAAGCGAATGCTACAGATATTCATATTGTCCC
CAAAAAGAAAGAATCCCACTTGCAATTTCGCATTTCTCACTCCTTACATCACAGAATGACATTGCCTCAAGCTCAATGTG
ACAGACTTATTTCACACTTTAAATTTACTGCATCAATGGATATTGGTGAAAGAAGACGGCCGCAAAGCGGTGCTATCAGC
ACAAAGCTAAATGGTCAGGACATTAGCCTCAGGCTCTCCACATTACCTGCAACTCCACATGAAAGTCTTGTTATTCGTTT
GCTTGCTGACAACAGCACCATCCCAATCGACAAAATTTCTTTATTTCCAAACACTTCAAAAAAACTGCTGTCACTGCTGA
AATATGCACATGGTCTTGTGCTATTTACAGGACCGACTGGTTCAGGCAAAACCTCCACATTATACTCACTTCTAAACAGC
AATTCCCATCTTTACAAGCGAAAGGTCATAAGCCTCGAGGACCCCATTGAAAAACCACAGGATAATGTTCTGCAAGTGCA
AGTAAATGAAAAAGCCGGAATTACGTATGCTTCTGGCCTGAGGGCTATTTTACGGCATGATCCAGACATTATTATGGTCG
GAGAAATAAGGGATGCAGATACTGCCCGGATAGCTGTAAGGGCATCGCTGACAGGACATCTTGTTCTTGCCACAATGCAT
ACAAGGGATGCAAAGGGAGCTATTTACAGATTGATGGAATTCGGCGTCAGTAAGGTAGATATACAGCAAACCCTTATAGC
TGTCACAGCGCAAAGATTAGTGGAGCTTGTCTGTCCGTATTGCAGCACAGATTGTCCGCCTTTTTGCTTTAGCGACCAAC
ATCGCAGCAAAAGGGCAAGTGTATTTGAAATATTGACAGGAAAGCTTATACAATCGCTTCTTGCTGAAACCTATGTTCAA
AACTTACACCCCAAACCTGCATTAAAGGAGGCAATCGGCAAGGGGATTGCCTTAGGCTATGTAAAGGAGACTGAGTATGC
TCGCTGGATTTATGAAGATTAA
TTGATTTCCATTGAAGCTTTAGCAAACCGACTCATAAGGGAGGCTGTTGAAGCGAATGCTACAGATATTCATATTGTCCC
CAAAAAGAAAGAATCCCACTTGCAATTTCGCATTTCTCACTCCTTACATCACAGAATGACATTGCCTCAAGCTCAATGTG
ACAGACTTATTTCACACTTTAAATTTACTGCATCAATGGATATTGGTGAAAGAAGACGGCCGCAAAGCGGTGCTATCAGC
ACAAAGCTAAATGGTCAGGACATTAGCCTCAGGCTCTCCACATTACCTGCAACTCCACATGAAAGTCTTGTTATTCGTTT
GCTTGCTGACAACAGCACCATCCCAATCGACAAAATTTCTTTATTTCCAAACACTTCAAAAAAACTGCTGTCACTGCTGA
AATATGCACATGGTCTTGTGCTATTTACAGGACCGACTGGTTCAGGCAAAACCTCCACATTATACTCACTTCTAAACAGC
AATTCCCATCTTTACAAGCGAAAGGTCATAAGCCTCGAGGACCCCATTGAAAAACCACAGGATAATGTTCTGCAAGTGCA
AGTAAATGAAAAAGCCGGAATTACGTATGCTTCTGGCCTGAGGGCTATTTTACGGCATGATCCAGACATTATTATGGTCG
GAGAAATAAGGGATGCAGATACTGCCCGGATAGCTGTAAGGGCATCGCTGACAGGACATCTTGTTCTTGCCACAATGCAT
ACAAGGGATGCAAAGGGAGCTATTTACAGATTGATGGAATTCGGCGTCAGTAAGGTAGATATACAGCAAACCCTTATAGC
TGTCACAGCGCAAAGATTAGTGGAGCTTGTCTGTCCGTATTGCAGCACAGATTGTCCGCCTTTTTGCTTTAGCGACCAAC
ATCGCAGCAAAAGGGCAAGTGTATTTGAAATATTGACAGGAAAGCTTATACAATCGCTTCTTGCTGAAACCTATGTTCAA
AACTTACACCCCAAACCTGCATTAAAGGAGGCAATCGGCAAGGGGATTGCCTTAGGCTATGTAAAGGAGACTGAGTATGC
TCGCTGGATTTATGAAGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
51.977 |
100 |
0.521 |