Detailed information NTG0717663

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: MGCS36044_RS10540
• Genome accession: NZ_CP117287
• Coordinates: 2142895..2144001 (+)
• Length: 368 a.a.
• NCBI ID: WP_084916590.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS36044
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2137895..2149001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS36044_RS10515 (MGCS36044_04240)	pgsA	2138005..2138547 (-)	543	WP_003062173.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
MGCS36044_RS10520 (MGCS36044_04242)	-	2138561..2139592 (-)	1032	WP_003061371.1	helix-turn-helix domain-containing protein	-
MGCS36044_RS10525 (MGCS36044_04244)	yfmH	2139642..2140925 (-)	1284	WP_084916595.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
MGCS36044_RS10530 (MGCS36044_04246)	yfmF	2140927..2142171 (-)	1245	WP_084916593.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
MGCS36044_RS10535 (MGCS36044_04248)	yaaA	2142480..2142893 (+)	414	WP_084916592.1	S4 domain-containing protein YaaA	-
MGCS36044_RS10540 (MGCS36044_04250)	recF	2142895..2144001 (+)	1107	WP_084916590.1	DNA replication/repair protein RecF	Machinery gene
MGCS36044_RS10545 (MGCS36044_04252)	-	2144058..2144921 (-)	864	WP_003055126.1	GRP family sugar transporter	-
MGCS36044_RS10550 (MGCS36044_04254)	guaB	2145133..2146614 (-)	1482	WP_003060436.1	IMP dehydrogenase	-
MGCS36044_RS10555 (MGCS36044_04256)	trpS	2146831..2147853 (-)	1023	WP_003055141.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41901.79 Da
• Isoelectric Point: 7.8105

>NTDB_id=717663 MGCS36044_RS10540 WP_084916590.1 2142895..2144001(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36044]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRVSGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGTRVMEHRIDFINALEKEANTHHQAISNGLENLSLSYQSSVVFDKRTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFQVTKGTIQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=717663 MGCS36044_RS10540 WP_084916590.1 2142895..2144001(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36044]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCATCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTGTTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGCGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGGGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAACCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAGCAAATTGATGCGGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCATTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAATCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAGAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTGGGCCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGAATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCAAGTGACAAAAGGAACCATTCAAGTTGATTCTGAAATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.187	98.913	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.455	100	0.462