Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   MGGS36055_RS09015 Genome accession   NZ_CP117286
Coordinates   1796307..1797341 (-) Length   344 a.a.
NCBI ID   WP_015017341.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1791307..1802341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGGS36055_RS08980 (MGGS36055_03614) - 1791931..1792233 (-) 303 WP_015017337.1 YlxQ-related RNA-binding protein -
  MGGS36055_RS08985 (MGGS36055_03616) - 1792226..1792522 (-) 297 WP_003057040.1 YlxR family protein -
  MGGS36055_RS08990 (MGGS36055_03618) nusA 1792538..1793695 (-) 1158 WP_003057051.1 transcription termination factor NusA -
  MGGS36055_RS08995 (MGGS36055_03620) rimP 1793838..1794332 (-) 495 WP_042357979.1 ribosome maturation factor RimP -
  MGGS36055_RS09005 (MGGS36055_03624) trmB 1794816..1795451 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  MGGS36055_RS09010 (MGGS36055_03626) - 1795451..1796242 (-) 792 WP_003052472.1 phosphotransferase family protein -
  MGGS36055_RS09015 (MGGS36055_03628) pptB 1796307..1797341 (-) 1035 WP_015017341.1 ABC transporter permease Regulator
  MGGS36055_RS09020 (MGGS36055_03630) pptA 1797344..1798069 (-) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  MGGS36055_RS09025 (MGGS36055_03632) - 1798141..1798560 (+) 420 WP_003057067.1 HIT family protein -
  MGGS36055_RS09030 (MGGS36055_03634) - 1798557..1798886 (+) 330 WP_003057072.1 hypothetical protein -
  MGGS36055_RS09035 (MGGS36055_03636) - 1799044..1800312 (-) 1269 WP_042357980.1 LCP family protein -
  MGGS36055_RS09040 (MGGS36055_03638) - 1800324..1800845 (-) 522 WP_003057063.1 GNAT family N-acetyltransferase -
  MGGS36055_RS09045 (MGGS36055_03640) tsaE 1800838..1801281 (-) 444 WP_041789229.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40194.42 Da        Isoelectric Point: 10.2471

>NTDB_id=717535 MGGS36055_RS09015 WP_015017341.1 1796307..1797341(-) (pptB) [Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055]
MKALFLKRRQDFQKQQSKYLRYVFNDHFVLVLMFLFGFCLVQYSQLLKHFPSNHWPIWLFLMVGMLLLLHLGSVATYLEE
PDHHFLLPKEEAVVAHIKQAERSALVIWGCLQTAILIFLYPIFNRLGFSLVTFALLLLGLLALKRLLLGYKVRHFLKKDG
LDWEKAIAFESNRKQAILKFYSLFTNVKGISTKVKKRSYLNPLLKLVKENSKHLWLTLYLKAFLRSSDYLGLFLRLLLLS
SLALLFISNAYLSVALALVFNYLILFQLLSLYHHYDYHYMTSLYPENHQGKRANLLTFLRGLSCLILVINLLLCHSLEKA
LILVAVMGVITLFYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=717535 MGGS36055_RS09015 WP_015017341.1 1796307..1797341(-) (pptB) [Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAGAGCAAATACCTGCGCTATGTCTTTAATGACCA
TTTTGTCTTGGTCCTGATGTTTTTGTTTGGTTTTTGTTTGGTGCAATACAGCCAGTTATTGAAGCATTTTCCTAGTAATC
ATTGGCCTATATGGCTCTTTCTCATGGTGGGGATGCTGTTATTGCTTCACTTGGGCTCGGTGGCAACTTATTTAGAAGAG
CCTGATCACCATTTTCTACTTCCGAAAGAAGAAGCTGTGGTTGCTCATATTAAACAAGCTGAACGCTCTGCCCTTGTAAT
TTGGGGCTGTTTACAGACAGCTATCCTCATCTTTTTATATCCGATCTTCAATCGCCTAGGCTTCTCCTTAGTTACTTTTG
CTCTTTTACTTTTGGGATTACTAGCTCTTAAACGACTCCTTTTGGGGTATAAAGTAAGACACTTTTTAAAGAAAGATGGA
CTGGATTGGGAAAAAGCCATTGCTTTTGAGAGTAATCGTAAACAGGCTATCTTAAAGTTTTATTCTCTTTTCACAAATGT
TAAGGGAATTTCCACAAAGGTTAAGAAAAGATCTTATTTAAATCCTCTTCTAAAATTGGTAAAAGAAAATAGTAAGCACC
TCTGGCTAACGCTCTATTTAAAAGCTTTTTTACGAAGTTCAGACTATTTAGGACTCTTTTTACGCTTATTATTATTGAGT
TCCCTAGCCTTGCTGTTTATTTCTAACGCTTACCTATCAGTGGCTTTAGCCTTGGTCTTTAATTATTTGATTCTTTTTCA
ATTGTTGTCTCTTTACCACCATTACGATTACCACTACATGACTAGTCTTTATCCAGAGAATCATCAAGGGAAGCGGGCGA
ATCTACTGACTTTTTTGAGAGGATTAAGTTGTCTGATATTAGTTATCAACCTCCTGCTCTGCCATTCTTTAGAAAAAGCC
CTTATTTTAGTAGCGGTCATGGGAGTTATTACGCTTTTCTACCTCCCTTATAAGTTGAAGAAGATAATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(156-327)

Bacterial ABC transporter protein EcsB (EcsB)

(2-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.802

100

0.468
  pptB Streptococcus salivarius strain HSISS4

46.512

100

0.465