Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   MGGS36055_RS02950 Genome accession   NZ_CP117286
Coordinates   537828..538010 (+) Length   60 a.a.
NCBI ID   WP_136019369.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 532828..543010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGGS36055_RS02900 (MGGS36055_01178) - 533326..533547 (+) 222 WP_275906349.1 hypothetical protein -
  MGGS36055_RS02905 (MGGS36055_01180) - 533547..534197 (+) 651 WP_275906350.1 hypothetical protein -
  MGGS36055_RS02910 (MGGS36055_01182) - 534338..535138 (-) 801 WP_158529155.1 recombinase family protein -
  MGGS36055_RS02915 (MGGS36055_01184) - 535260..535511 (-) 252 WP_048327312.1 hypothetical protein -
  MGGS36055_RS02920 (MGGS36055_01186) - 535652..535798 (-) 147 WP_164406938.1 hypothetical protein -
  MGGS36055_RS02925 (MGGS36055_01188) - 535952..536161 (+) 210 WP_048327315.1 helix-turn-helix transcriptional regulator -
  MGGS36055_RS02930 (MGGS36055_01190) - 536344..536634 (-) 291 WP_046176802.1 hypothetical protein -
  MGGS36055_RS02935 (MGGS36055_01192) - 536650..536835 (-) 186 WP_046176801.1 helix-turn-helix transcriptional regulator -
  MGGS36055_RS02940 (MGGS36055_01194) - 536832..537311 (-) 480 WP_046176800.1 hypothetical protein -
  MGGS36055_RS02945 (MGGS36055_01196) - 537344..537652 (-) 309 WP_158529480.1 hypothetical protein -
  MGGS36055_RS02950 (MGGS36055_01198) prx 537828..538010 (+) 183 WP_136019369.1 Paratox Regulator
  MGGS36055_RS02955 (MGGS36055_01200) - 538097..540505 (+) 2409 WP_042358035.1 DNA translocase FtsK -
  MGGS36055_RS02960 (MGGS36055_01202) - 540574..540927 (-) 354 WP_012766635.1 DUF3397 domain-containing protein -
  MGGS36055_RS02965 (MGGS36055_01204) rplK 541170..541595 (+) 426 WP_003049875.1 50S ribosomal protein L11 -
  MGGS36055_RS02970 (MGGS36055_01206) rplA 541701..542390 (+) 690 WP_003049876.1 50S ribosomal protein L1 -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6908.76 Da        Isoelectric Point: 3.8705

>NTDB_id=717489 MGGS36055_RS02950 WP_136019369.1 537828..538010(+) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055]
MLTYDEFKQAIDDGYIVGDTVIIVRKNGQIFDYVLPNEEARNGEVVTDEKVEEVLMELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=717489 MGGS36055_RS02950 WP_136019369.1 537828..538010(+) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain MGGS36055]
ATGCTAACATACGATGAGTTTAAGCAAGCTATTGATGACGGATATATCGTAGGCGATACAGTAATAATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGACGAAAAAGTGGAAGAAG
TATTGATGGAATTAGATAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

88.333

100

0.883

  prx Streptococcus pyogenes MGAS315

81.667

100

0.817

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS8232

80

100

0.8

  prx Streptococcus pyogenes MGAS315

71.667

100

0.717

  prx Streptococcus pyogenes MGAS315

95.349

71.667

0.683

  prx Streptococcus pyogenes MGAS315

73.81

70

0.517