Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   NUU08_RS11705 Genome accession   NZ_CP102522
Coordinates   2274436..2275722 (-) Length   428 a.a.
NCBI ID   WP_003130591.1    Uniprot ID   A0AB35KDA8
Organism   Lactococcus lactis strain R-707-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2269436..2280722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUU08_RS11690 (NUU08_11685) - 2270672..2271208 (-) 537 WP_003130594.1 hypothetical protein -
  NUU08_RS11695 (NUU08_11690) - 2271214..2272500 (-) 1287 WP_003130593.1 FAD/NAD(P)-binding oxidoreductase -
  NUU08_RS11700 (NUU08_11695) - 2272516..2274366 (-) 1851 WP_003130592.1 proline--tRNA ligase -
  NUU08_RS11705 (NUU08_11700) eeP 2274436..2275722 (-) 1287 WP_003130591.1 RIP metalloprotease RseP Regulator
  NUU08_RS11710 (NUU08_11705) - 2275741..2276544 (-) 804 WP_003130590.1 phosphatidate cytidylyltransferase -
  NUU08_RS11715 (NUU08_11710) - 2276544..2277278 (-) 735 WP_003130589.1 isoprenyl transferase -
  NUU08_RS11720 (NUU08_11715) yajC 2277652..2277984 (-) 333 WP_003130588.1 preprotein translocase subunit YajC -
  NUU08_RS11725 (NUU08_11720) - 2278079..2278777 (-) 699 WP_003130586.1 DNA alkylation repair protein -
  NUU08_RS11730 (NUU08_11725) rlmH 2278796..2279275 (-) 480 WP_003130585.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 46411.97 Da        Isoelectric Point: 6.7741

>NTDB_id=717467 NUU08_RS11705 WP_003130591.1 2274436..2275722(-) (eeP) [Lactococcus lactis strain R-707-1]
MIETLITFIIIFGIIVAIHEYGHLWWAKRSGILVREYAVGMGPKIFAHQAKDGTLYTIRILPLGGYVRLAGWGDDKTEIK
KGQAASLVVSKSEVVNPEAENSVSNIVRRINLSEHVELEEAIPMLITEYDFEKELFIEGEVFGEIKRYSVDHDATIIEED
GTEVRIAPLDVQYQSAGVFHKMLTNFGGPLNNFILGIIAFIVLTFVQGGVPSTTNAIGQVEKGTPAYNAGLKAGDKIEAV
NGTKTADWNNVVTEISGSKGKELKLEVSRSGKSETLSVTPKKMDGSYRVGIMQSMKTGFFDKITGGFVRAGQSATAIFKA
LGSLIARPSLDKLGGPVAIYQLSGQAARAGLPTIINLLAMLSINLGIVNLFPIPVLDGGKIVLNIIEAIRGKALSQEKES
IITMVGVVFMLVLFVAVTWNDILRAFVN

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=717467 NUU08_RS11705 WP_003130591.1 2274436..2275722(-) (eeP) [Lactococcus lactis strain R-707-1]
TTGATAGAAACACTGATTACTTTTATTATTATCTTTGGTATTATTGTCGCTATCCATGAATATGGCCATCTTTGGTGGGC
AAAACGTTCAGGAATTTTAGTGCGTGAATATGCCGTTGGAATGGGCCCGAAAATTTTTGCTCACCAAGCAAAAGATGGGA
CACTTTACACGATAAGAATTCTTCCACTCGGTGGCTATGTTCGTTTGGCTGGTTGGGGTGATGACAAGACTGAAATCAAA
AAAGGACAAGCTGCAAGTCTTGTTGTCAGTAAATCTGAAGTAGTAAATCCAGAAGCTGAAAATTCTGTCAGTAATATCGT
CAGAAGAATTAATCTGTCAGAACATGTTGAATTAGAAGAAGCAATTCCAATGTTGATTACTGAATATGATTTTGAAAAAG
AACTTTTCATTGAAGGAGAAGTTTTTGGGGAAATCAAACGTTATTCTGTTGATCATGATGCAACAATCATTGAAGAAGAT
GGAACAGAAGTTCGGATTGCACCACTCGATGTTCAATATCAATCAGCCGGTGTCTTTCATAAAATGTTGACAAACTTCGG
TGGTCCTTTGAATAACTTTATTTTAGGAATCATCGCTTTTATCGTTCTAACCTTTGTTCAAGGAGGCGTTCCTTCAACTA
CTAATGCTATTGGCCAAGTTGAAAAAGGAACACCCGCTTACAATGCTGGCTTAAAAGCTGGTGATAAAATTGAAGCAGTC
AATGGAACTAAAACGGCAGATTGGAACAATGTTGTTACTGAAATTTCAGGTTCTAAAGGAAAAGAATTAAAACTTGAAGT
TAGCCGTTCAGGCAAATCGGAAACCTTATCAGTTACACCAAAAAAAATGGACGGAAGTTATCGTGTTGGCATTATGCAGT
CAATGAAAACAGGTTTCTTTGATAAGATTACAGGTGGCTTTGTTCGAGCAGGCCAATCAGCTACAGCAATCTTTAAAGCT
TTAGGAAGTTTGATTGCACGACCGAGTCTTGATAAACTTGGTGGCCCAGTTGCTATATATCAACTCAGTGGCCAAGCCGC
GAGAGCAGGTTTGCCGACGATTATTAATCTTTTAGCTATGCTTTCAATTAATTTAGGGATTGTCAATCTTTTTCCTATTC
CAGTACTTGATGGTGGAAAAATTGTCCTAAATATTATTGAAGCAATTCGTGGCAAAGCACTCTCACAAGAAAAGGAATCA
ATCATCACAATGGTAGGAGTTGTCTTCATGCTTGTGCTCTTTGTAGCAGTAACATGGAATGATATTCTCCGAGCCTTTGT
AAATTAA

Domains


Predicted by InterproScan.

(7-413)

(218-269)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.845

100

0.572

  eeP Streptococcus thermophilus LMD-9

56.613

100

0.57