Detailed information NTG0717455

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: MGCS36083_RS10885
• Genome accession: NZ_CP117285
• Coordinates: 2197345..2198451 (+)
• Length: 368 a.a.
• NCBI ID: WP_084916590.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2192345..2203451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MGCS36083_RS10860 (MGCS36083_04410)	pgsA	2192455..2192997 (-)	543	WP_003062173.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
MGCS36083_RS10865 (MGCS36083_04412)	-	2193011..2194042 (-)	1032	WP_003061371.1	helix-turn-helix domain-containing protein	-
MGCS36083_RS10870 (MGCS36083_04414)	yfmH	2194092..2195375 (-)	1284	WP_084916595.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
MGCS36083_RS10875 (MGCS36083_04416)	yfmF	2195377..2196621 (-)	1245	WP_084916593.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
MGCS36083_RS10880 (MGCS36083_04418)	yaaA	2196930..2197343 (+)	414	WP_084916592.1	S4 domain-containing protein YaaA	-
MGCS36083_RS10885 (MGCS36083_04420)	recF	2197345..2198451 (+)	1107	WP_084916590.1	DNA replication/repair protein RecF	Machinery gene
MGCS36083_RS10890 (MGCS36083_04422)	-	2198508..2199371 (-)	864	WP_003055126.1	GRP family sugar transporter	-
MGCS36083_RS10895 (MGCS36083_04424)	guaB	2199583..2201064 (-)	1482	WP_003060436.1	IMP dehydrogenase	-
MGCS36083_RS10900 (MGCS36083_04426)	trpS	2201281..2202303 (-)	1023	WP_003055141.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41901.79 Da
• Isoelectric Point: 7.8105

>NTDB_id=717455 MGCS36083_RS10885 WP_084916590.1 2197345..2198451(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083]
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTRSHRTRADKELIHFDHSTVSLTGKIQRVSGT
VDLEINLSDKGRVTKINALKQAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSELSHYNHVLKQR
NSYLKSAQQIDAAFLAVLDEQLASYGTRVMEHRIDFINALEKEANTHHQAISNGLENLSLSYQSSVVFDKRTNIYQQFLH
QLEKNHQKDFFRKNTSVGPHRDDLAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALTGDNPILLLDDVMSELDNTRQ
TKLLETVIKENVQTFITTTSLDHLSQLPEGIRIFQVTKGTIQVDSEIH

Nucleotide

• Length: 1107 bp

>NTDB_id=717455 MGCS36083_RS10885 WP_084916590.1 2197345..2198451(+) (recF) [Streptococcus dysgalactiae subsp. equisimilis strain MGCS36083]
ATGTGGATTAAAGAGTTAGAGTTAAAACATTATCGCAATTATGACCACCTGCTTGCCTCATTTTCATCGGGTTTAAATGT
CTTTATCGGTAATAATGCTCAAGGAAAAACCAATTTTCTCGAGGCAATCTATTTTCTATCACTTACTAGAAGTCATCGCA
CGAGGGCTGATAAAGAATTGATTCATTTTGATCACTCAACTGTTTCTCTTACTGGTAAGATTCAGCGTGTTAGTGGTACT
GTTGATTTAGAAATCAATCTATCAGATAAAGGACGCGTGACAAAGATTAATGCGCTAAAGCAAGCAAAATTATCTGATTA
TATTGGAACGATGATGGTTGTGCTTTTTGCACCAGAAGATTTGCAACTAGTTAAGGGGGCACCTAGCCTTCGTCGCAAAT
TTATCGACATTGACCTTGGTCAAATTAAACCTGTTTACTTATCTGAGTTATCCCATTATAACCACGTGCTTAAACAGCGT
AATAGCTATTTAAAAAGTGCCCAGCAAATTGATGCGGCTTTTCTAGCTGTTCTAGATGAGCAATTAGCTAGCTATGGAAC
CCGTGTCATGGAACATCGTATTGATTTTATCAATGCATTAGAGAAAGAAGCAAATACTCATCACCAAGCCATCTCAAATG
GTTTAGAAAATCTCTCTCTCTCCTATCAGTCGTCAGTTGTCTTTGACAAAAGAACTAATATTTACCAACAATTTTTACAC
CAACTTGAAAAAAATCATCAGAAAGATTTCTTCCGTAAAAACACTAGTGTGGGCCCACATCGCGATGACTTAGCCTTTTA
CATTAACGGAATGAATGCTAACTTTGCTAGTCAAGGTCAGCACCGCAGCCTTATTCTTTCCTTAAAAATGGCTGAAGTTA
GTTTAATGAAGGCCTTGACTGGAGATAATCCCATTCTTTTACTAGACGATGTCATGAGCGAGCTAGACAATACACGACAA
ACAAAGTTACTTGAAACAGTAATTAAAGAAAATGTCCAAACCTTTATCACAACAACAAGTTTGGATCACCTGTCACAGTT
GCCAGAAGGTATCCGTATTTTTCAAGTGACAAAAGGAACCATTCAAGTTGATTCTGAAATTCACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.187	98.913	0.625
recF	Bacillus subtilis subsp. subtilis str. 168	45.455	100	0.462