Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NQE15_RS23170 Genome accession   NZ_CP102486
Coordinates   4652261..4652635 (-) Length   124 a.a.
NCBI ID   WP_265945198.1    Uniprot ID   -
Organism   Dechloromonas sp. A34     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4647261..4657635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQE15_RS23155 - 4649188..4651326 (-) 2139 WP_265945192.1 methyl-accepting chemotaxis protein -
  NQE15_RS23160 - 4651365..4651877 (-) 513 WP_265945194.1 chemotaxis protein CheW -
  NQE15_RS23165 - 4651881..4652246 (-) 366 WP_265945196.1 response regulator transcription factor -
  NQE15_RS23170 pilG 4652261..4652635 (-) 375 WP_265945198.1 response regulator Regulator
  NQE15_RS23175 thiD 4652863..4653741 (+) 879 WP_265945200.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  NQE15_RS23180 thiE 4653734..4654360 (+) 627 WP_265945202.1 thiamine phosphate synthase -
  NQE15_RS23185 hemL 4654357..4655646 (+) 1290 WP_265945204.1 glutamate-1-semialdehyde 2,1-aminomutase -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 13743.84 Da        Isoelectric Point: 5.8334

>NTDB_id=717262 NQE15_RS23170 WP_265945198.1 4652261..4652635(-) (pilG) [Dechloromonas sp. A34]
MVIDDSNTIRRSAEIFLVQAGCQVVLAEDGFDALAKIADHQPSVIFCDIMMPRLDGYQTCSLIKKNPRFKSTPVIMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLQTVATFALPAEPESNQ

Nucleotide


Download         Length: 375 bp        

>NTDB_id=717262 NQE15_RS23170 WP_265945198.1 4652261..4652635(-) (pilG) [Dechloromonas sp. A34]
ATGGTCATTGACGACAGCAACACCATACGGCGCAGCGCCGAGATTTTTCTCGTGCAGGCCGGGTGCCAAGTTGTTCTCGC
CGAAGACGGCTTCGACGCCCTCGCCAAGATCGCCGACCACCAACCCAGCGTGATCTTCTGCGACATCATGATGCCGCGTC
TCGACGGCTATCAAACCTGTTCGCTGATCAAGAAGAATCCCCGTTTCAAGTCCACGCCGGTGATCATGTTGTCCTCAAAG
GACGGCCTTTTCGACCGGGCGCGTGGCCGGATGGTCGGTTCCGACCAATATCTGACCAAGCCTTTCACCAAAGACAGCCT
GCTGCAAACGGTCGCCACCTTTGCCTTGCCGGCCGAGCCAGAATCCAACCAGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.766

89.516

0.589
  pilH Synechocystis sp. PCC 6803

40.541

89.516

0.363