Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   NRE15_RS02995 Genome accession   NZ_CP102453
Coordinates   647858..649120 (-) Length   420 a.a.
NCBI ID   WP_313794137.1    Uniprot ID   -
Organism   Fundicoccus culcitae strain DM20194951     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 642858..654120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NRE15_RS02990 (NRE15_03005) - 643478..647782 (-) 4305 WP_313794136.1 PolC-type DNA polymerase III -
  NRE15_RS02995 (NRE15_03010) eeP 647858..649120 (-) 1263 WP_313794137.1 RIP metalloprotease RseP Regulator
  NRE15_RS03000 (NRE15_03015) - 649136..649930 (-) 795 WP_313794138.1 phosphatidate cytidylyltransferase -
  NRE15_RS03005 (NRE15_03020) - 649947..650675 (-) 729 WP_313794139.1 isoprenyl transferase -
  NRE15_RS03010 (NRE15_03025) frr 650888..651448 (-) 561 WP_313794140.1 ribosome recycling factor -
  NRE15_RS03015 (NRE15_03030) - 651962..654097 (+) 2136 WP_313794141.1 M28 family peptidase -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 46161.24 Da        Isoelectric Point: 4.2094

>NTDB_id=717092 NRE15_RS02995 WP_313794137.1 647858..649120(-) (eeP) [Fundicoccus culcitae strain DM20194951]
MQTLIVFLIVFSIIVVFHEFGHFYFARRAGILVREFSLGMGPKLFARQGKDGTTYTVRMLPLGGYVRLAGLNEEDNVHPG
MEVGLTFNDANQVSMINTSDKPELNEMPAQVDEVDLAENMTIRVYQTGHEEAQTFDVSKECRIIEEDGTNVKVAPIESRY
ESASVWNKLLTNFAGPMNNFILSIVCFILFAFLVPGIPSNSSTIGTVVEDSPAQVAGLEDGDQVIAINYNAVDTWTDLQQ
YIASSPGEELVFSVERDNQVIELPVQVNTVTNEDGTTIGQIGVSVAMKTGVLDRIMYGFSETWRIITSILSVLVGMIKNG
FDINQFGGPIAMAQMTNEVVDYGFTVIISFLAMLSANIGLLNLLPIPALDGGKIILNLIEAIRGKPLAQEKEGIITLIGV
GIMFVFMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=717092 NRE15_RS02995 WP_313794137.1 647858..649120(-) (eeP) [Fundicoccus culcitae strain DM20194951]
ATGCAAACGCTAATTGTTTTTTTAATCGTGTTTTCAATAATTGTGGTTTTCCACGAGTTTGGACACTTTTATTTTGCAAG
ACGTGCTGGAATTTTAGTGCGTGAGTTTTCGTTAGGTATGGGCCCTAAATTATTTGCTAGACAAGGAAAAGACGGAACGA
CCTATACCGTTAGAATGTTACCTCTAGGCGGATATGTTCGCTTAGCGGGTTTAAATGAGGAAGATAATGTCCATCCGGGT
ATGGAAGTTGGCTTAACTTTTAATGATGCTAATCAAGTATCGATGATTAATACGAGTGACAAACCAGAACTTAATGAAAT
GCCTGCACAAGTAGATGAAGTAGATTTAGCTGAAAATATGACGATTCGTGTTTATCAAACGGGTCATGAAGAAGCGCAGA
CATTTGATGTTTCCAAAGAATGTCGGATTATTGAAGAAGATGGGACCAATGTTAAGGTCGCTCCTATAGAAAGTCGATAC
GAATCAGCCTCTGTTTGGAATAAATTGTTGACTAATTTTGCAGGACCCATGAATAATTTCATTTTATCCATTGTTTGCTT
TATTTTGTTTGCTTTTTTAGTACCTGGTATTCCATCAAATAGTAGTACGATTGGAACGGTTGTGGAAGATAGCCCTGCTC
AAGTTGCTGGTTTAGAAGATGGGGATCAAGTCATTGCCATTAATTATAACGCGGTTGATACTTGGACCGATTTACAGCAG
TATATTGCGTCATCACCGGGTGAAGAATTAGTATTTAGTGTCGAACGCGATAACCAAGTAATCGAATTACCCGTTCAAGT
CAATACCGTTACCAATGAAGATGGTACCACCATCGGTCAAATCGGCGTGTCAGTTGCTATGAAAACAGGCGTTTTAGATC
GCATAATGTATGGATTTTCTGAAACCTGGCGTATAATCACAAGTATATTATCTGTTTTAGTAGGTATGATTAAAAATGGG
TTTGATATTAATCAATTTGGTGGTCCTATTGCTATGGCTCAAATGACTAATGAAGTCGTTGATTACGGCTTTACCGTTAT
TATAAGCTTTTTAGCGATGTTAAGTGCGAATATCGGTCTTTTGAATTTATTACCTATTCCAGCCTTAGATGGTGGGAAAA
TAATCTTGAATTTAATTGAAGCGATTAGAGGAAAACCGTTGGCACAAGAAAAAGAGGGGATTATCACACTCATTGGAGTT
GGGATTATGTTTGTCTTTATGATTGCTGTAACTTGGAATGATATTATGCGAGCCTTTTTCTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(204-256)

Peptidase family M50 (Peptidase_M50)

(7-405)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

47.086

100

0.481
  eeP Streptococcus thermophilus LMD-9

47.086

100

0.481