Detailed information NTG0716552

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PQS36_RS19895
• Genome accession: NZ_CP117043
• Coordinates: 4090291..4091316 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain B-RalR
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4085291..4096316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PQS36_RS19865	zapB	4085375..4085620 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PQS36_RS19870	rraA	4085705..4086190 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PQS36_RS19875	menA	4086283..4087209 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PQS36_RS19880	hslU	4087276..4088607 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PQS36_RS19885	hslV	4088617..4089147 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PQS36_RS19890	ftsN	4089240..4090199 (-)	960	WP_000068828.1	cell division protein FtsN	-
PQS36_RS19895	cytR	4090291..4091316 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PQS36_RS19900	priA	4091472..4093670 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
PQS36_RS19905	rpmE	4093873..4094085 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
PQS36_RS19910	-	4094140..4094763 (-)	624	WP_000720774.1	TIGR02117 family protein	-
PQS36_RS19915	yiiX	4094770..4095378 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
PQS36_RS19920	metJ	4095562..4095879 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=716552 PQS36_RS19895 WP_000644904.1 4090291..4091316(-) (cytR) [Escherichia coli strain B-RalR]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=716552 PQS36_RS19895 WP_000644904.1 4090291..4091316(-) (cytR) [Escherichia coli strain B-RalR]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628