Detailed information NTG0071633

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: JMUB1273_RS07710
• Genome accession: NZ_AP018922
• Coordinates: 1550495..1550992 (-)
• Length: 165 a.a.
• NCBI ID: WP_029642894.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain JMUB1273
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1545495..1555992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JMUB1273_RS07685 (JMUB1273_1434)	gcvPB	1545657..1547129 (-)	1473	WP_000202189.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
JMUB1273_RS07690 (JMUB1273_1435)	gcvPA	1547122..1548468 (-)	1347	WP_117196782.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
JMUB1273_RS07695 (JMUB1273_1436)	gcvT	1548488..1549579 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
JMUB1273_RS07700 (JMUB1273_1437)	-	1549738..1550262 (-)	525	WP_001015119.1	shikimate kinase	-
JMUB1273_RS07705	-	1550252..1550398 (-)	147	WP_001789879.1	hypothetical protein	-
JMUB1273_RS07710 (JMUB1273_1438)	comGF	1550495..1550992 (-)	498	WP_029642894.1	competence type IV pilus minor pilin ComGF	Machinery gene
JMUB1273_RS07715 (JMUB1273_1439)	comGE	1550910..1551209 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
JMUB1273_RS07720 (JMUB1273_1440)	comGD	1551196..1551642 (-)	447	WP_119267455.1	competence type IV pilus minor pilin ComGD	Machinery gene
JMUB1273_RS07725 (JMUB1273_1441)	comGC	1551620..1551931 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
JMUB1273_RS07730 (JMUB1273_1442)	comGB	1551945..1553015 (-)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
JMUB1273_RS07735 (JMUB1273_1443)	comGA	1552987..1553961 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
JMUB1273_RS07740 (JMUB1273_1444)	-	1554013..1554636 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
JMUB1273_RS07745 (JMUB1273_1445)	-	1554633..1554962 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
JMUB1273_RS07750 (JMUB1273_1446)	-	1554962..1555948 (-)	987	WP_000161314.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19196.92 Da
• Isoelectric Point: 10.2192

>NTDB_id=71633 JMUB1273_RS07710 WP_029642894.1 1550495..1550992(-) (comGF) [Staphylococcus aureus strain JMUB1273]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTNVDFEFFSRDI
LEDFKGVDRNDIEIRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=71633 JMUB1273_RS07710 WP_029642894.1 1550495..1550992(-) (comGF) [Staphylococcus aureus strain JMUB1273]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAAATGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGAGTAGATAGAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (70-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus N315	97.576	100	0.976
comGF	Staphylococcus aureus MW2	97.576	100	0.976