Detailed information NTG0716196

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NRL37_RS08815
• Genome accession: NZ_CP102328
• Coordinates: 1874614..1876836 (+)
• Length: 740 a.a.
• NCBI ID: WP_268194557.1
• Uniprot ID: -
• Organism: Metapseudomonas otitidis strain BC12
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1869614..1881836

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NRL37_RS08785 (NRL37_08785)	-	1869713..1870006 (-)	294	WP_107328902.1	phosphodiesterase	-
NRL37_RS08790 (NRL37_08790)	-	1870011..1870592 (-)	582	WP_268194554.1	PilZ domain-containing protein	-
NRL37_RS08795 (NRL37_08795)	-	1870691..1871941 (+)	1251	WP_268194555.1	lipoprotein-releasing ABC transporter permease subunit	-
NRL37_RS08800 (NRL37_08800)	lolD	1871943..1872626 (+)	684	WP_268195386.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
NRL37_RS08805 (NRL37_08805)	-	1872628..1873872 (+)	1245	WP_268194556.1	lipoprotein-releasing ABC transporter permease subunit	-
NRL37_RS08810 (NRL37_08810)	-	1873936..1874466 (-)	531	WP_044404954.1	DUF2062 domain-containing protein	-
NRL37_RS08815 (NRL37_08815)	comA	1874614..1876836 (+)	2223	WP_268194557.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NRL37_RS08820 (NRL37_08820)	-	1876909..1877544 (+)	636	WP_044404948.1	MotA/TolQ/ExbB proton channel family protein	-
NRL37_RS08825 (NRL37_08825)	-	1877541..1877984 (+)	444	WP_044404945.1	ExbD/TolR family protein	-
NRL37_RS08830 (NRL37_08830)	lpxK	1877984..1878988 (+)	1005	WP_268194559.1	tetraacyldisaccharide 4'-kinase	-
NRL37_RS08835 (NRL37_08835)	-	1879024..1879209 (+)	186	WP_069561688.1	Trm112 family protein	-
NRL37_RS08840 (NRL37_08840)	kdsB	1879209..1879973 (+)	765	WP_044404936.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NRL37_RS08845 (NRL37_08845)	-	1879973..1880434 (+)	462	WP_236211471.1	low molecular weight protein-tyrosine-phosphatase	-
NRL37_RS08850 (NRL37_08850)	murB	1880431..1881450 (+)	1020	WP_268194560.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 79331.73 Da
• Isoelectric Point: 9.1364

>NTDB_id=716196 NRL37_RS08815 WP_268194557.1 1874614..1876836(+) (comA) [Metapseudomonas otitidis strain BC12]
MRGFWLALAGGLLALRFLPALPPGWLLLGLAGIGAVLLPWRARALGVALIGFAWACHCAQVALDDRLDPALDGTTRWLQG
QVVGLPQQDGGVVRFELVPAAIEGLRLPGRMRVSWYGGPEVRSGETWRLAVTLRRPRGLVNPHTFDYEAWLLARHIGATG
TVKAGERLMAAEGPGAWRDDLRQAIQQAEARGRNGTIAALVLGDGSGLSSRDWRHLQDTGTVHLMVISGQHISLLALLLY
GAVAALARLGLWPTRLPWLPCACALALAGALGYGALAGFDVPVQRACLMTALVLLWRLRFRRLGVVTPLLAVLCIVLLMD
PLASLQAGFWLSFAAVALLVLVFAGRLGSPPAWRSAWRAQWALSLALTPALMALALPISLSGPLANLVAVPWVSFVSVPL
SLAGTALHAVPGLGEGLLWLAGLSLEGLFLLLGWIAEAMPAWQAPALAVWSWGLVLLGCLLLILPPALPFRLPGLLLLVL
LAWPPLQRPAPGTADVRVLDVGQGLAVLVLTEHHTLLYDAGPRQGGFDLGERVVVPALRGLGVRHLDELLLSHADNDHSG
GAEAVVRALSVARVISGEVERLPPGLNAQPCEARQWEWDGVHLRTWRWPEARDSNDRSCVLTLEANGERLHLTGDLGQAA
EAAWVESGEPLAADWLLAPHHGSRSSSSARLLQAVRPRGALISRGARNAFGHPHPQVLARYRALPAALYDTAESGALLIR
LGTHGEVSGLRSQARFWREK

Nucleotide

• Length: 2223 bp

>NTDB_id=716196 NRL37_RS08815 WP_268194557.1 1874614..1876836(+) (comA) [Metapseudomonas otitidis strain BC12]
ATGCGAGGTTTCTGGCTGGCCCTGGCCGGCGGGCTGCTGGCGCTGCGCTTCCTGCCGGCGCTGCCGCCCGGTTGGCTGCT
GCTGGGGCTGGCGGGCATCGGCGCGGTGCTGCTGCCCTGGCGGGCGCGAGCGCTGGGCGTCGCCCTGATCGGCTTCGCCT
GGGCCTGTCACTGTGCCCAGGTCGCCCTCGACGACCGGCTCGACCCGGCGCTGGACGGCACCACCCGCTGGCTGCAGGGG
CAGGTGGTCGGCCTGCCGCAGCAGGACGGCGGCGTGGTGCGCTTCGAACTGGTGCCCGCCGCCATCGAAGGGCTGCGCCT
GCCCGGGCGGATGCGGGTGTCCTGGTACGGTGGGCCGGAGGTGCGCAGCGGCGAGACCTGGCGACTGGCCGTCACCCTTC
GCCGCCCGCGTGGCCTGGTGAACCCCCACACCTTCGACTACGAGGCCTGGCTGCTGGCCCGGCACATCGGCGCCACCGGC
ACGGTGAAGGCGGGCGAGCGGCTCATGGCGGCCGAAGGGCCAGGCGCCTGGCGTGACGACCTGCGCCAGGCCATCCAGCA
GGCTGAGGCGCGGGGGCGCAACGGCACCATCGCCGCGCTGGTCCTGGGTGATGGCTCCGGTCTCAGCAGCCGCGACTGGC
GGCACCTGCAGGACACCGGCACGGTCCACCTGATGGTCATCTCCGGGCAGCACATCTCCCTGCTGGCGCTGCTGCTCTAC
GGCGCTGTGGCCGCCCTGGCCCGGCTCGGGCTCTGGCCAACGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCGCTGGCCCT
GGCCGGTGCCCTTGGCTATGGGGCGCTGGCCGGGTTCGACGTACCGGTGCAGCGCGCCTGCCTGATGACCGCCCTGGTGC
TGCTCTGGCGCCTGCGTTTCCGCCGGCTCGGGGTAGTCACGCCGCTGTTGGCGGTGCTTTGTATCGTGCTGCTGATGGAC
CCACTGGCCTCCCTGCAGGCGGGCTTCTGGCTCTCCTTCGCAGCCGTGGCGCTGTTGGTGCTGGTGTTCGCCGGGCGCCT
GGGCAGCCCGCCGGCCTGGCGCAGCGCGTGGCGGGCACAGTGGGCCCTGAGCCTGGCGCTGACCCCGGCGCTGATGGCCC
TTGCCCTGCCCATCAGCCTCAGCGGCCCCCTGGCCAACCTGGTGGCGGTGCCCTGGGTCAGCTTCGTCTCGGTGCCGCTG
TCCCTGGCCGGCACGGCCCTGCACGCCGTGCCCGGCCTGGGTGAAGGCCTGCTGTGGCTGGCGGGGCTTTCCCTGGAGGG
GCTCTTCCTTCTATTGGGCTGGATCGCCGAGGCGATGCCGGCCTGGCAGGCGCCTGCACTGGCGGTCTGGAGCTGGGGCC
TGGTGCTGCTGGGCTGCCTGCTGCTGATCCTGCCGCCGGCGCTGCCCTTTCGTCTGCCGGGGCTGCTGTTGCTGGTGCTG
CTGGCCTGGCCGCCATTGCAGCGGCCTGCGCCTGGTACGGCGGATGTCCGCGTGCTGGACGTGGGGCAGGGCCTGGCGGT
GCTGGTGCTCACCGAGCACCACACCTTGCTGTATGACGCCGGCCCGCGCCAGGGTGGCTTCGACCTGGGCGAGCGGGTGG
TGGTGCCGGCCCTGCGCGGGCTGGGTGTACGGCATCTGGACGAACTGCTGCTGAGCCACGCCGACAACGACCATTCCGGC
GGGGCCGAGGCGGTGGTGCGCGCCCTGTCCGTGGCGCGGGTGATCAGCGGCGAGGTGGAGCGCCTGCCGCCCGGTCTCAA
CGCCCAGCCCTGCGAAGCCCGCCAGTGGGAGTGGGATGGCGTGCACCTGCGCACCTGGCGCTGGCCCGAGGCCCGCGACA
GCAATGATCGCTCCTGCGTGCTCACCCTCGAGGCCAACGGCGAGCGCCTGCACCTGACCGGCGACCTCGGCCAGGCCGCC
GAAGCCGCCTGGGTGGAGAGCGGCGAGCCCCTCGCTGCGGACTGGCTGCTGGCGCCCCACCATGGCAGCCGCAGCTCCTC
CTCGGCGCGCCTGCTGCAGGCGGTGCGGCCGCGCGGGGCGCTGATCTCCCGGGGCGCGCGCAACGCCTTCGGTCATCCCC
ATCCCCAGGTGCTGGCGCGTTACCGTGCGCTGCCGGCGGCTCTTTACGACACCGCCGAGTCCGGCGCGCTGCTGATTCGC
CTGGGCACCCACGGCGAGGTGTCGGGACTGCGGAGCCAGGCACGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Competence protein (Competence) (200-465)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.699	97.027	0.599
comA	Ralstonia pseudosolanacearum GMI1000	35.782	100	0.408