Detailed information NTG0716191

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NL415_RS16230
• Genome accession: NZ_CP117016
• Coordinates: 3183062..3184087 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MLI121
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3178062..3189087

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NL415_RS16200 (NL415_016200)	zapB	3178146..3178391 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
NL415_RS16205 (NL415_016205)	rraA	3178476..3178961 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NL415_RS16210 (NL415_016210)	menA	3179054..3179980 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NL415_RS16215 (NL415_016215)	hslU	3180047..3181378 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NL415_RS16220 (NL415_016220)	hslV	3181388..3181918 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NL415_RS16225 (NL415_016225)	ftsN	3182011..3182970 (-)	960	WP_000068834.1	cell division protein FtsN	-
NL415_RS16230 (NL415_016230)	cytR	3183062..3184087 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NL415_RS16235 (NL415_016235)	priA	3184243..3186441 (-)	2199	WP_001469197.1	primosomal protein N'	Machinery gene
NL415_RS16240 (NL415_016240)	rpmE	3186644..3186856 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
NL415_RS16245 (NL415_016245)	yiiX	3186917..3187525 (-)	609	WP_000702310.1	YiiX family permuted papain-like enzyme	-
NL415_RS16250 (NL415_016250)	metJ	3187585..3187902 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=716191 NL415_RS16230 WP_000644904.1 3183062..3184087(-) (cytR) [Escherichia coli strain MLI121]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=716191 NL415_RS16230 WP_000644904.1 3183062..3184087(-) (cytR) [Escherichia coli strain MLI121]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628