Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NRL37_RS01965 Genome accession   NZ_CP102328
Coordinates   392764..393171 (+) Length   135 a.a.
NCBI ID   WP_021218373.1    Uniprot ID   A0AB36F8H0
Organism   Metapseudomonas otitidis strain BC12     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 387764..398171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NRL37_RS01935 (NRL37_01935) - 387934..388938 (-) 1005 WP_044403578.1 aspartate carbamoyltransferase catalytic subunit -
  NRL37_RS01940 (NRL37_01940) pyrR 388964..389473 (-) 510 WP_044403576.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  NRL37_RS01945 (NRL37_01945) ruvX 389486..389929 (-) 444 WP_044403573.1 Holliday junction resolvase RuvX -
  NRL37_RS01950 (NRL37_01950) - 389929..390498 (-) 570 WP_044403571.1 YqgE/AlgH family protein -
  NRL37_RS01955 (NRL37_01955) - 390545..391438 (-) 894 WP_182851510.1 energy transducer TonB -
  NRL37_RS01960 (NRL37_01960) gshB 391526..392497 (-) 972 WP_268193844.1 glutathione synthase -
  NRL37_RS01965 (NRL37_01965) pilG 392764..393171 (+) 408 WP_021218373.1 twitching motility response regulator PilG Regulator
  NRL37_RS01970 (NRL37_01970) pilH 393219..393584 (+) 366 WP_003458790.1 twitching motility response regulator PilH -
  NRL37_RS01975 (NRL37_01975) - 393628..394164 (+) 537 WP_044403557.1 chemotaxis protein CheW -
  NRL37_RS01980 (NRL37_01980) - 394358..396403 (+) 2046 WP_044403555.1 methyl-accepting chemotaxis protein -
  NRL37_RS01985 (NRL37_01985) - 396466..397326 (+) 861 WP_044403650.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14842.21 Da        Isoelectric Point: 6.7128

>NTDB_id=716188 NRL37_RS01965 WP_021218373.1 392764..393171(+) (pilG) [Metapseudomonas otitidis strain BC12]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCEVITAVDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=716188 NRL37_RS01965 WP_021218373.1 392764..393171(+) (pilG) [Metapseudomonas otitidis strain BC12]
ATGGAACAGCATTCCGAGGGTTTGAAGGTGATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACTCTGCT
GAAGAAGGTGGGTTGCGAGGTCATCACGGCTGTCGACGGTTTCGATGCCCTGGCCAAGATCGCGGACACACACCCGAACA
TCATCTTTGTCGACATCATGATGCCGCGTCTCGACGGTTATCAGACCTGCGCCCTGATCAAGAACAACAGTGCTTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGCATCGTCGGTTCCGACCAGTA
CCTCACCAAGCCCTTCAGCAAGGAAGAACTGCTCGGCGCGATCAAGACCCACGTGCCTGATTTCACCCCGGTGGAACAAG
CCTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.8

92.593

0.711
  vicR Streptococcus mutans UA159

41.27

93.333

0.385