Detailed information NTG0716126

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NL414_RS24955
• Genome accession: NZ_CP117013
• Coordinates: 5023484..5024509 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain MLI114
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5018484..5029509

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NL414_RS24935 (NL414_024935)	metJ	5019669..5019986 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NL414_RS24940 (NL414_024940)	yiiX	5020046..5020654 (+)	609	WP_000702310.1	YiiX family permuted papain-like enzyme	-
NL414_RS24945 (NL414_024945)	rpmE	5020715..5020927 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NL414_RS24950 (NL414_024950)	priA	5021130..5023328 (+)	2199	WP_001469197.1	primosomal protein N'	Machinery gene
NL414_RS24955 (NL414_024955)	cytR	5023484..5024509 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NL414_RS24960 (NL414_024960)	ftsN	5024601..5025560 (+)	960	WP_000068834.1	cell division protein FtsN	-
NL414_RS24965 (NL414_024965)	hslV	5025653..5026183 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NL414_RS24970 (NL414_024970)	hslU	5026193..5027524 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NL414_RS24975 (NL414_024975)	menA	5027591..5028517 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NL414_RS24980 (NL414_024980)	rraA	5028610..5029095 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NL414_RS24985 (NL414_024985)	zapB	5029180..5029425 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=716126 NL414_RS24955 WP_000644904.1 5023484..5024509(+) (cytR) [Escherichia coli strain MLI114]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=716126 NL414_RS24955 WP_000644904.1 5023484..5024509(+) (cytR) [Escherichia coli strain MLI114]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628