Detailed information    

insolico Bioinformatically predicted

Overview

Name   tsaP   Type   Machinery gene
Locus tag   URS_RS03935 Genome accession   NZ_AP018824
Coordinates   805082..806233 (+) Length   383 a.a.
NCBI ID   WP_004985575.1    Uniprot ID   A0A3G9FM33
Organism   Acinetobacter ursingii strain M3     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 800082..811233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  URS_RS03910 (URS_0807) - 800223..801428 (+) 1206 WP_004985562.1 oxygenase MpaB family protein -
  URS_RS03915 (URS_0808) - 801474..801731 (-) 258 WP_004985566.1 hypothetical protein -
  URS_RS03920 (URS_0809) - 801775..803817 (-) 2043 WP_004985567.1 TonB-dependent copper receptor -
  URS_RS03925 (URS_0810) - 803919..804350 (-) 432 WP_370685012.1 DUF2946 family protein -
  URS_RS03930 (URS_0811) def 804436..804960 (-) 525 WP_004985572.1 peptide deformylase -
  URS_RS03935 (URS_0812) tsaP 805082..806233 (+) 1152 WP_004985575.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  URS_RS03940 (URS_0813) dprA 806245..807375 (+) 1131 WP_004985578.1 DNA-processing protein DprA Machinery gene
  URS_RS03945 (URS_0814) - 807418..807990 (+) 573 WP_004985579.1 L-threonylcarbamoyladenylate synthase -
  URS_RS03950 (URS_0815) - 808484..809401 (-) 918 WP_005001710.1 ABC transporter permease -
  URS_RS03955 (URS_0816) - 809411..810517 (-) 1107 WP_004985584.1 ABC transporter permease -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 42210.40 Da        Isoelectric Point: 9.1290

>NTDB_id=71568 URS_RS03935 WP_004985575.1 805082..806233(+) (tsaP) [Acinetobacter ursingii strain M3]
MKKVLHGIRSFNALGLKKHCIAVAICAGLGMTGLSATYAASPNVNPPSLRASAPNVYVVKKGDTLWDISGKFLDKPWRWP
EIWASNKHVKNPHWIYPGDRLLLCTLDGRPLVGRDEGDGCEGIIRRYSGRTTLQPQVRIEQLSNTIPVIPLDNIKQWLDR
TAIVASDSIENTPYILGTADQRVLAGKGQNVYVRGQGLTSGQRYAVYRKGEPYVLTDANGKKHTVGLELLQVASGIVTQV
DHDIATMELTDSYNAEVRRGDLVMFEQEAMLPTLFYPTEANQVTQGGQIIRVMGSIGSAAKNSVVTIDRGRLDGVQSGHV
FAIYQQGETVQDPKTKERIKLPNQKVGTLMVFRTFDQLSYAYVLESSLPIKVGAEILPPRLDD

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=71568 URS_RS03935 WP_004985575.1 805082..806233(+) (tsaP) [Acinetobacter ursingii strain M3]
ATGAAAAAGGTTTTGCACGGCATTCGATCATTTAATGCCTTGGGGTTGAAAAAACATTGTATCGCTGTGGCGATTTGCGC
TGGACTCGGGATGACGGGACTCAGTGCAACCTACGCAGCAAGTCCAAACGTGAATCCACCTTCACTCAGAGCAAGCGCAC
CAAATGTTTATGTCGTTAAAAAAGGCGATACATTGTGGGATATTTCAGGAAAATTTCTGGATAAACCTTGGCGCTGGCCT
GAAATCTGGGCAAGCAATAAACACGTTAAGAACCCGCACTGGATTTATCCCGGTGATCGCTTGTTGTTATGTACGCTAGA
TGGACGTCCACTGGTAGGCCGTGACGAAGGTGATGGTTGTGAAGGTATTATCCGTCGTTATTCGGGACGAACCACGCTAC
AGCCTCAAGTTCGTATTGAACAACTCAGTAATACGATTCCTGTGATTCCACTGGACAATATCAAACAATGGTTAGATCGT
ACCGCCATTGTCGCGAGTGACAGTATCGAAAATACACCTTATATTTTAGGGACAGCAGATCAGCGTGTACTGGCAGGTAA
AGGGCAAAATGTTTATGTACGCGGTCAGGGCCTAACTTCGGGTCAACGCTATGCGGTCTATCGTAAAGGCGAACCTTATG
TGCTGACAGATGCAAATGGCAAAAAACACACCGTGGGCTTGGAATTACTGCAAGTCGCTTCAGGTATTGTGACTCAAGTC
GACCATGATATTGCCACCATGGAACTGACCGATAGCTACAATGCTGAAGTTCGTCGTGGTGATCTGGTCATGTTTGAACA
AGAAGCCATGTTACCAACTTTGTTCTATCCAACAGAAGCCAATCAGGTGACTCAAGGTGGACAGATCATTCGGGTAATGG
GTTCAATCGGTTCTGCTGCTAAAAATAGTGTAGTCACCATTGATCGTGGTCGTCTGGATGGTGTGCAATCAGGTCATGTT
TTTGCAATTTATCAACAAGGTGAAACGGTTCAGGACCCTAAAACCAAAGAAAGAATCAAATTACCAAATCAGAAAGTCGG
AACCTTGATGGTATTTAGAACTTTTGACCAACTAAGCTATGCCTATGTGTTAGAAAGTTCCCTACCGATTAAAGTGGGTG
CTGAGATTTTGCCTCCCCGTCTTGACGATTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(57-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3G9FM33

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

70.833

100

0.71

Multiple sequence alignment