Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | K6K39_RS02205 | Genome accession | NZ_AP024135 |
| Coordinates | 531347..533860 (-) | Length | 837 a.a. |
| NCBI ID | WP_221333922.1 | Uniprot ID | - |
| Organism | Streptomyces sp. EAS-AB2608 strain NBRC 114648 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 526347..538860
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6K39_RS02180 (EASAB2608_00470) | - | 526582..526839 (-) | 258 | WP_059247154.1 | hypothetical protein | - |
| K6K39_RS02185 (EASAB2608_00471) | - | 526973..528637 (-) | 1665 | WP_221333921.1 | FAD-binding oxidoreductase | - |
| K6K39_RS02190 (EASAB2608_00472) | - | 528881..529753 (-) | 873 | WP_059247152.1 | trypsin-like serine protease | - |
| K6K39_RS02195 (EASAB2608_00473) | - | 530139..530507 (+) | 369 | WP_223283678.1 | STAS domain-containing protein | - |
| K6K39_RS41900 | - | 530587..530664 (-) | 78 | WP_391045673.1 | 50S ribosomal protein L37 | - |
| K6K39_RS02200 (EASAB2608_00474) | - | 530837..531295 (+) | 459 | WP_059247151.1 | GreA/GreB family elongation factor | - |
| K6K39_RS02205 (EASAB2608_00475) | clpC | 531347..533860 (-) | 2514 | WP_221333922.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| K6K39_RS02210 (EASAB2608_00476) | - | 535337..535696 (+) | 360 | WP_059247149.1 | thioesterase family protein | - |
| K6K39_RS02215 (EASAB2608_00477) | - | 536092..536973 (-) | 882 | WP_059247148.1 | YegS/Rv2252/BmrU family lipid kinase | - |
| K6K39_RS02220 (EASAB2608_00478) | - | 537019..538611 (-) | 1593 | WP_221333923.1 | FAD-binding oxidoreductase | - |
Sequence
Protein
Download Length: 837 a.a. Molecular weight: 90793.38 Da Isoelectric Point: 4.8375
>NTDB_id=71568 K6K39_RS02205 WP_221333922.1 531347..533860(-) (clpC) [Streptomyces sp. EAS-AB2608 strain NBRC 114648]
MSMSFGAPFGSSDPFSELLNRFFGMSPASSPPAVQRVPIGRLLTESSQQLLNLAAQRAAEDGTSDLDTEHLLWAATQVAP
SRRLLSQAGVDPDAVATDLAEVLPRESGEPSARPGLTPAAKRTLGAAYAQSQAAGVSYIGPEHILGALLGDSDTGAARLL
RAEGLDAKRLTGLTEEAATRTEGAPAERKKPATTLDEYGRDLTEEAKAGKLDPVVGRAEEIEQTIEILSRRSKNNPVLIG
EPGVGKTAIVEGLAQRIVAEEVPEALKNKRVVSLDLSGMVAGAQYRGQFEERLKKVIEDVQAAGGDIILFIDELHTVVGA
GATGEGAMDAGNMLKPALARGDLHVVGATTIDEYRKYIEKDAALERRFQPVLVPEPTVEETVQILEGLRDAYEAHHQVRF
DDGALAAAAELSDRYISDRFLPDKAIDVMDQAGARVRLRSAGRSTEVVSREDRIAKLRRELEQAVSAEDFEKASELKREI
AEAEGELAGIEERREGVVSVTAADIADVVSRRTGIPVSQLTASEKEKLLRLEEEMHARIVGQDEAVTAVSQAVRRNRAGM
GDPNRPVGSFLFLGPTGVGKTELAKTLAALLFGEEDRMIRFDMSEFQEKHTVARLVGAPPGYVGYEEAGQLTEKVRRQPY
SVVLFDEVEKAHPDVFNTLLQILDDGRLTDAQGRTVDFRHCVVIMTSNIGAHRILDHKGEVSDLKDALMDDLRTRFLPEF
LNRIDDIIVFHGLTEDDLGRIVDQLLDRSRHKVHAQGIGLEVTEAAKKLLIAHGHQPEFGARPLRRTIQAELDNRIATLL
LSGEASPGDTIVADVRDDSLHCSVRRGEPEAPSAQGS
MSMSFGAPFGSSDPFSELLNRFFGMSPASSPPAVQRVPIGRLLTESSQQLLNLAAQRAAEDGTSDLDTEHLLWAATQVAP
SRRLLSQAGVDPDAVATDLAEVLPRESGEPSARPGLTPAAKRTLGAAYAQSQAAGVSYIGPEHILGALLGDSDTGAARLL
RAEGLDAKRLTGLTEEAATRTEGAPAERKKPATTLDEYGRDLTEEAKAGKLDPVVGRAEEIEQTIEILSRRSKNNPVLIG
EPGVGKTAIVEGLAQRIVAEEVPEALKNKRVVSLDLSGMVAGAQYRGQFEERLKKVIEDVQAAGGDIILFIDELHTVVGA
GATGEGAMDAGNMLKPALARGDLHVVGATTIDEYRKYIEKDAALERRFQPVLVPEPTVEETVQILEGLRDAYEAHHQVRF
DDGALAAAAELSDRYISDRFLPDKAIDVMDQAGARVRLRSAGRSTEVVSREDRIAKLRRELEQAVSAEDFEKASELKREI
AEAEGELAGIEERREGVVSVTAADIADVVSRRTGIPVSQLTASEKEKLLRLEEEMHARIVGQDEAVTAVSQAVRRNRAGM
GDPNRPVGSFLFLGPTGVGKTELAKTLAALLFGEEDRMIRFDMSEFQEKHTVARLVGAPPGYVGYEEAGQLTEKVRRQPY
SVVLFDEVEKAHPDVFNTLLQILDDGRLTDAQGRTVDFRHCVVIMTSNIGAHRILDHKGEVSDLKDALMDDLRTRFLPEF
LNRIDDIIVFHGLTEDDLGRIVDQLLDRSRHKVHAQGIGLEVTEAAKKLLIAHGHQPEFGARPLRRTIQAELDNRIATLL
LSGEASPGDTIVADVRDDSLHCSVRRGEPEAPSAQGS
Nucleotide
Download Length: 2514 bp
>NTDB_id=71568 K6K39_RS02205 WP_221333922.1 531347..533860(-) (clpC) [Streptomyces sp. EAS-AB2608 strain NBRC 114648]
ATGTCGATGTCGTTCGGTGCACCGTTCGGTTCGTCGGATCCCTTCAGCGAGCTGTTGAACCGGTTCTTCGGTATGTCACC
GGCGTCCTCGCCCCCCGCGGTGCAGCGCGTCCCCATCGGCCGGCTGCTGACGGAGTCGTCGCAGCAACTGCTGAACCTGG
CCGCGCAACGGGCCGCCGAGGACGGCACCTCCGACCTCGACACCGAGCACCTGCTCTGGGCGGCCACCCAGGTCGCCCCG
TCGCGCCGGCTGCTCTCCCAGGCCGGCGTGGACCCCGACGCCGTCGCCACCGACCTGGCCGAGGTCCTCCCGCGCGAGTC
CGGCGAGCCCTCCGCGCGACCGGGCCTGACCCCGGCGGCCAAACGCACGCTCGGCGCCGCCTACGCCCAGTCGCAGGCGG
CCGGTGTGTCCTACATCGGCCCCGAGCACATCCTGGGCGCCCTGCTCGGCGACAGCGACACGGGTGCCGCCCGGCTGCTG
CGGGCGGAGGGCCTGGACGCCAAGCGCCTCACCGGCCTGACCGAGGAGGCGGCGACCCGTACCGAAGGAGCCCCGGCCGA
ACGGAAGAAGCCGGCCACGACCCTGGACGAGTACGGCCGGGATCTGACGGAGGAGGCGAAGGCCGGCAAGCTCGACCCGG
TCGTCGGGCGGGCCGAGGAGATCGAGCAGACCATCGAGATCCTCTCCCGGCGCTCCAAGAACAACCCCGTGCTGATCGGC
GAACCCGGAGTCGGCAAGACCGCCATCGTGGAGGGCCTGGCCCAGCGCATCGTGGCGGAGGAGGTGCCCGAGGCCCTGAA
GAACAAGCGGGTCGTCTCGCTGGACCTGTCGGGCATGGTGGCGGGCGCGCAGTACCGGGGGCAGTTCGAGGAGCGGCTGA
AGAAGGTCATCGAGGACGTCCAGGCGGCCGGCGGCGACATCATCCTCTTCATCGACGAACTGCACACGGTCGTCGGCGCC
GGCGCCACCGGCGAGGGCGCCATGGACGCGGGCAACATGCTCAAGCCCGCCCTCGCGCGCGGGGACCTCCACGTGGTGGG
CGCCACGACCATCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGCCGGTTCCAGCCGGTGCTGGTCC
CGGAGCCCACGGTCGAGGAGACGGTCCAGATCCTGGAGGGGCTGCGCGACGCCTACGAGGCCCACCACCAAGTCCGCTTC
GACGACGGAGCGTTGGCCGCCGCCGCCGAACTGTCCGACCGGTACATCAGCGACCGCTTCCTGCCGGACAAGGCGATCGA
CGTGATGGACCAGGCCGGCGCGCGGGTGCGGCTGCGCAGCGCCGGACGCTCCACCGAGGTCGTGAGCCGCGAGGACCGTA
TCGCCAAGCTGCGCAGGGAACTCGAACAGGCCGTGTCCGCCGAGGACTTCGAGAAGGCCTCGGAACTCAAGCGGGAGATC
GCCGAGGCGGAGGGCGAACTCGCCGGCATCGAGGAACGCCGCGAGGGCGTCGTCTCGGTCACGGCCGCCGACATCGCCGA
CGTCGTCTCCCGCCGCACCGGCATCCCGGTCTCCCAGCTCACCGCCAGCGAGAAGGAGAAGCTCCTCCGGCTGGAGGAGG
AGATGCACGCGCGGATCGTGGGCCAGGACGAGGCGGTCACCGCCGTCTCCCAGGCCGTACGCCGCAACCGGGCCGGCATG
GGCGACCCGAACCGGCCCGTGGGGTCCTTCCTCTTCCTCGGTCCGACCGGTGTCGGCAAGACCGAACTCGCCAAGACCCT
CGCCGCCCTCCTGTTCGGCGAGGAGGACCGCATGATCCGGTTCGACATGAGCGAGTTCCAGGAGAAGCACACCGTCGCCC
GGCTGGTCGGCGCGCCTCCCGGATACGTCGGCTACGAGGAGGCCGGCCAGCTCACCGAGAAGGTCCGCCGCCAGCCCTAC
AGCGTGGTGCTCTTCGACGAGGTGGAGAAGGCCCACCCCGACGTCTTCAACACGCTGCTGCAGATCCTGGACGACGGACG
GCTGACCGACGCCCAGGGCCGCACCGTCGATTTCCGGCACTGCGTCGTCATCATGACGTCCAACATCGGCGCGCACCGCA
TCCTGGACCACAAGGGCGAGGTGTCCGACCTCAAGGACGCGTTGATGGACGACCTGCGCACCCGTTTCCTGCCGGAGTTC
CTCAACCGGATCGACGACATCATCGTCTTCCACGGCCTGACCGAGGACGACCTGGGGCGGATCGTGGACCAGCTGCTGGA
CCGGAGCAGGCACAAGGTGCACGCCCAGGGCATCGGCCTGGAGGTCACGGAGGCGGCCAAGAAGCTGCTCATCGCCCACG
GCCACCAGCCGGAGTTCGGCGCCCGCCCGCTGCGCCGCACGATCCAGGCGGAACTCGACAACCGCATCGCCACCCTGCTG
CTGAGCGGCGAGGCGAGTCCCGGCGACACCATCGTGGCCGACGTGCGGGACGACTCGCTGCACTGCTCGGTGCGGCGGGG
CGAGCCGGAAGCGCCGTCGGCGCAAGGAAGCTGA
ATGTCGATGTCGTTCGGTGCACCGTTCGGTTCGTCGGATCCCTTCAGCGAGCTGTTGAACCGGTTCTTCGGTATGTCACC
GGCGTCCTCGCCCCCCGCGGTGCAGCGCGTCCCCATCGGCCGGCTGCTGACGGAGTCGTCGCAGCAACTGCTGAACCTGG
CCGCGCAACGGGCCGCCGAGGACGGCACCTCCGACCTCGACACCGAGCACCTGCTCTGGGCGGCCACCCAGGTCGCCCCG
TCGCGCCGGCTGCTCTCCCAGGCCGGCGTGGACCCCGACGCCGTCGCCACCGACCTGGCCGAGGTCCTCCCGCGCGAGTC
CGGCGAGCCCTCCGCGCGACCGGGCCTGACCCCGGCGGCCAAACGCACGCTCGGCGCCGCCTACGCCCAGTCGCAGGCGG
CCGGTGTGTCCTACATCGGCCCCGAGCACATCCTGGGCGCCCTGCTCGGCGACAGCGACACGGGTGCCGCCCGGCTGCTG
CGGGCGGAGGGCCTGGACGCCAAGCGCCTCACCGGCCTGACCGAGGAGGCGGCGACCCGTACCGAAGGAGCCCCGGCCGA
ACGGAAGAAGCCGGCCACGACCCTGGACGAGTACGGCCGGGATCTGACGGAGGAGGCGAAGGCCGGCAAGCTCGACCCGG
TCGTCGGGCGGGCCGAGGAGATCGAGCAGACCATCGAGATCCTCTCCCGGCGCTCCAAGAACAACCCCGTGCTGATCGGC
GAACCCGGAGTCGGCAAGACCGCCATCGTGGAGGGCCTGGCCCAGCGCATCGTGGCGGAGGAGGTGCCCGAGGCCCTGAA
GAACAAGCGGGTCGTCTCGCTGGACCTGTCGGGCATGGTGGCGGGCGCGCAGTACCGGGGGCAGTTCGAGGAGCGGCTGA
AGAAGGTCATCGAGGACGTCCAGGCGGCCGGCGGCGACATCATCCTCTTCATCGACGAACTGCACACGGTCGTCGGCGCC
GGCGCCACCGGCGAGGGCGCCATGGACGCGGGCAACATGCTCAAGCCCGCCCTCGCGCGCGGGGACCTCCACGTGGTGGG
CGCCACGACCATCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGCCGGTTCCAGCCGGTGCTGGTCC
CGGAGCCCACGGTCGAGGAGACGGTCCAGATCCTGGAGGGGCTGCGCGACGCCTACGAGGCCCACCACCAAGTCCGCTTC
GACGACGGAGCGTTGGCCGCCGCCGCCGAACTGTCCGACCGGTACATCAGCGACCGCTTCCTGCCGGACAAGGCGATCGA
CGTGATGGACCAGGCCGGCGCGCGGGTGCGGCTGCGCAGCGCCGGACGCTCCACCGAGGTCGTGAGCCGCGAGGACCGTA
TCGCCAAGCTGCGCAGGGAACTCGAACAGGCCGTGTCCGCCGAGGACTTCGAGAAGGCCTCGGAACTCAAGCGGGAGATC
GCCGAGGCGGAGGGCGAACTCGCCGGCATCGAGGAACGCCGCGAGGGCGTCGTCTCGGTCACGGCCGCCGACATCGCCGA
CGTCGTCTCCCGCCGCACCGGCATCCCGGTCTCCCAGCTCACCGCCAGCGAGAAGGAGAAGCTCCTCCGGCTGGAGGAGG
AGATGCACGCGCGGATCGTGGGCCAGGACGAGGCGGTCACCGCCGTCTCCCAGGCCGTACGCCGCAACCGGGCCGGCATG
GGCGACCCGAACCGGCCCGTGGGGTCCTTCCTCTTCCTCGGTCCGACCGGTGTCGGCAAGACCGAACTCGCCAAGACCCT
CGCCGCCCTCCTGTTCGGCGAGGAGGACCGCATGATCCGGTTCGACATGAGCGAGTTCCAGGAGAAGCACACCGTCGCCC
GGCTGGTCGGCGCGCCTCCCGGATACGTCGGCTACGAGGAGGCCGGCCAGCTCACCGAGAAGGTCCGCCGCCAGCCCTAC
AGCGTGGTGCTCTTCGACGAGGTGGAGAAGGCCCACCCCGACGTCTTCAACACGCTGCTGCAGATCCTGGACGACGGACG
GCTGACCGACGCCCAGGGCCGCACCGTCGATTTCCGGCACTGCGTCGTCATCATGACGTCCAACATCGGCGCGCACCGCA
TCCTGGACCACAAGGGCGAGGTGTCCGACCTCAAGGACGCGTTGATGGACGACCTGCGCACCCGTTTCCTGCCGGAGTTC
CTCAACCGGATCGACGACATCATCGTCTTCCACGGCCTGACCGAGGACGACCTGGGGCGGATCGTGGACCAGCTGCTGGA
CCGGAGCAGGCACAAGGTGCACGCCCAGGGCATCGGCCTGGAGGTCACGGAGGCGGCCAAGAAGCTGCTCATCGCCCACG
GCCACCAGCCGGAGTTCGGCGCCCGCCCGCTGCGCCGCACGATCCAGGCGGAACTCGACAACCGCATCGCCACCCTGCTG
CTGAGCGGCGAGGCGAGTCCCGGCGACACCATCGTGGCCGACGTGCGGGACGACTCGCTGCACTGCTCGGTGCGGCGGGG
CGAGCCGGAAGCGCCGTCGGCGCAAGGAAGCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.5 |
95.579 |
0.483 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.262 |
95.818 |
0.434 |
| clpC | Streptococcus mutans UA159 |
41.869 |
98.447 |
0.412 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.821 |
76.225 |
0.403 |
| clpC | Streptococcus thermophilus LMD-9 |
44.016 |
89.845 |
0.395 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.525 |
89.486 |
0.389 |
| clpE | Streptococcus mutans UA159 |
52.76 |
73.596 |
0.388 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.49 |
86.738 |
0.386 |
| clpC | Streptococcus pneumoniae Rx1 |
44.215 |
86.738 |
0.384 |
| clpC | Streptococcus pneumoniae D39 |
44.215 |
86.738 |
0.384 |
| clpE | Streptococcus pneumoniae D39 |
52.373 |
72.999 |
0.382 |
| clpE | Streptococcus pneumoniae R6 |
52.373 |
72.999 |
0.382 |
| clpE | Streptococcus pneumoniae Rx1 |
52.373 |
72.999 |
0.382 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.295 |
72.879 |
0.381 |