Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilS   Type   Regulator
Locus tag   URS_RS03685 Genome accession   NZ_AP018824
Coordinates   750705..752273 (+) Length   522 a.a.
NCBI ID   WP_010588809.1    Uniprot ID   A0A3F3L610
Organism   Acinetobacter ursingii strain M3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 745705..757273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  URS_RS03665 (URS_0755) - 746169..747470 (+) 1302 WP_010588808.1 homoserine dehydrogenase -
  URS_RS03670 (URS_0756) thrC 747531..748670 (+) 1140 WP_005001803.1 threonine synthase -
  URS_RS03675 (URS_0757) pbpG 748772..749833 (-) 1062 WP_119686664.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  URS_RS03680 (URS_0758) - 750048..750683 (+) 636 WP_004995355.1 response regulator -
  URS_RS03685 (URS_0759) pilS 750705..752273 (+) 1569 WP_010588809.1 ATP-binding protein Regulator
  URS_RS03690 (URS_0760) pilR 752293..753723 (+) 1431 WP_026039946.1 sigma-54 dependent transcriptional regulator Regulator
  URS_RS03695 (URS_0761) - 753741..754919 (-) 1179 WP_004995358.1 S41 family peptidase -
  URS_RS03700 (URS_0762) gpmI 754934..756484 (-) 1551 WP_010588812.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence


Protein


Download         Length: 522 a.a.        Molecular weight: 59646.41 Da        Isoelectric Point: 6.1856

>NTDB_id=71565 URS_RS03685 WP_010588809.1 750705..752273(+) (pilS) [Acinetobacter ursingii strain M3]
MQAQSSTPLSYTIYRLGLWYTLYRLLIVTGLIIIFQLISEQLNADYNQPVLYFYTLIAYCVASLIQFLLFKFYPRQIDRQ
LIIVFVVDVIALGLLTFSLGAPNLNISLLYVITVFSAAILLPRKVSLVITLLAVISLIYQQFFSSFFDYNNLSTIGNSAL
LAFLFFVMYGIGQVAVKHFKILENISFRQSQALYQLQNINRYILEQIDDGYLVLDENYHVVLSNPAACTLLGIPPLFAHE
QLPLAKTQPDLFELLRFDPLEDGEQFIFESQLSTYNVHIKVQRLIVPHQALILLRLQDVQQLNQQVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELYIGSESEQQHLLQKMISKQSKRINDIIEDTLRMARNDTTHPMLIELDSFLSHLLTEDLSDVQ
HQIRLEMTEKVIVQFDPKQLTQVLINLIRNALRHNDPDVDQIVLSVRMVQAEVFIDVIDFGNGIEKRDISQLFKPFFSTE
IKGTGLGLYLSHSLCEANHAKLSYVEQQKGACFRIQCSTKDK

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=71565 URS_RS03685 WP_010588809.1 750705..752273(+) (pilS) [Acinetobacter ursingii strain M3]
ATGCAGGCGCAATCTTCTACGCCACTTTCTTATACGATTTACCGTTTAGGTTTGTGGTACACCCTTTACCGCCTGCTTAT
TGTCACAGGTTTAATCATTATTTTTCAGCTCATTTCTGAGCAGTTAAATGCCGACTATAATCAACCTGTATTGTATTTTT
ATACGCTTATCGCTTATTGCGTAGCCAGTCTGATTCAGTTTTTATTGTTTAAGTTTTATCCACGACAGATTGATCGTCAA
CTGATTATAGTGTTTGTGGTTGATGTCATTGCATTGGGATTGCTGACATTTTCTCTGGGCGCACCAAATTTAAATATTAG
TTTGCTGTATGTTATTACGGTGTTTTCTGCCGCGATTTTACTGCCCAGAAAAGTCTCTTTGGTGATCACGCTTCTTGCTG
TTATTTCACTGATCTATCAACAGTTTTTTTCAAGTTTTTTTGATTATAATAATTTAAGCACCATTGGAAATAGTGCTTTA
CTGGCTTTTTTGTTTTTTGTCATGTATGGCATTGGTCAAGTTGCTGTAAAACATTTTAAAATTCTGGAAAATATTAGCTT
TCGTCAATCCCAAGCGCTATATCAACTTCAAAATATTAATCGTTATATTTTAGAACAAATTGATGATGGCTATCTGGTAT
TAGATGAAAACTACCATGTGGTGCTCAGCAATCCAGCCGCCTGTACGCTGTTGGGCATTCCGCCATTATTTGCGCATGAA
CAACTTCCGTTGGCCAAAACCCAGCCCGATTTATTTGAGCTTTTAAGATTTGATCCCTTAGAAGACGGCGAACAATTTAT
TTTTGAATCACAACTGTCTACTTATAACGTGCATATCAAGGTACAACGCTTGATCGTGCCACATCAGGCTTTAATTTTAT
TGCGCTTGCAGGATGTGCAGCAGCTCAATCAACAGGTTCAACAGCTTAAACTTGCCGCTTTAGGACAACTTTCCGCCAGT
ATTGCCCACGAAATTCGTAACCCATTGGCAGCGATTGTACAGGCCAATGAACTGTATATTGGCAGCGAATCTGAACAGCA
ACATTTACTGCAAAAAATGATCAGTAAACAATCAAAACGTATCAATGATATTATTGAAGATACATTGCGTATGGCGCGCA
ATGACACCACGCATCCGATGCTGATTGAGTTAGATAGCTTTTTGTCTCATTTACTGACTGAAGATTTATCCGATGTTCAA
CATCAAATCCGCTTGGAGATGACCGAGAAGGTAATCGTTCAATTTGATCCAAAACAGTTAACCCAAGTTTTAATCAACCT
GATTCGCAATGCATTACGCCATAATGATCCAGATGTTGATCAGATTGTATTATCCGTACGTATGGTTCAAGCTGAAGTAT
TCATTGATGTGATTGATTTTGGCAATGGCATCGAAAAACGTGATATATCGCAACTATTTAAGCCATTTTTTAGTACCGAA
ATCAAGGGAACTGGTTTAGGATTATATTTGTCCCATAGTCTGTGTGAAGCCAATCACGCCAAGCTCAGTTATGTGGAACA
ACAAAAAGGAGCATGTTTTAGAATTCAATGCTCAACAAAAGATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3F3L610

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

63.514

99.234

0.63


Multiple sequence alignment