Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | URS_RS03300 | Genome accession | NZ_AP018824 |
| Coordinates | 672676..673176 (-) | Length | 166 a.a. |
| NCBI ID | WP_005263832.1 | Uniprot ID | N9QI79 |
| Organism | Acinetobacter ursingii strain M3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 667676..678176
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| URS_RS03265 (URS_0673) | - | 667810..668850 (+) | 1041 | WP_119686940.1 | lipase secretion chaperone | - |
| URS_RS03270 (URS_0674) | - | 668944..669906 (+) | 963 | WP_004985154.1 | triacylglycerol lipase | - |
| URS_RS03275 (URS_0675) | rplS | 669966..670337 (-) | 372 | WP_004985149.1 | 50S ribosomal protein L19 | - |
| URS_RS03280 (URS_0676) | trmD | 670485..671228 (-) | 744 | WP_119686939.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| URS_RS03285 (URS_0677) | rimM | 671282..671830 (-) | 549 | WP_119686938.1 | ribosome maturation factor RimM | - |
| URS_RS03290 (URS_0678) | rpsP | 671847..672104 (-) | 258 | WP_119686945.1 | 30S ribosomal protein S16 | - |
| URS_RS03295 (URS_0679) | - | 672245..672682 (-) | 438 | WP_005263831.1 | type IV pilin protein | - |
| URS_RS03300 (URS_0680) | comE | 672676..673176 (-) | 501 | WP_005263832.1 | type IV pilin protein | Machinery gene |
| URS_RS03305 (URS_0681) | - | 673176..677108 (-) | 3933 | WP_227546615.1 | hypothetical protein | - |
| URS_RS03315 (URS_0682) | - | 677124..677864 (-) | 741 | WP_370685032.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18356.44 Da Isoelectric Point: 9.7161
>NTDB_id=71562 URS_RS03300 WP_005263832.1 672676..673176(-) (comE) [Acinetobacter ursingii strain M3]
MRKLSGFTLIELMVVVVIIAILAAIAIPSYQSFIRKNLTAQVQQEMLKLADQLERHKAKNFSYKKFDPKYLYAGTVAMPE
VFVPGGIFNVATSKYKIELKDISRATTENLLTTDNGMVWSMKATPLDLSDGKLYTLLLTSTGVRCKTTASSNVSYSACTG
SGVEQW
MRKLSGFTLIELMVVVVIIAILAAIAIPSYQSFIRKNLTAQVQQEMLKLADQLERHKAKNFSYKKFDPKYLYAGTVAMPE
VFVPGGIFNVATSKYKIELKDISRATTENLLTTDNGMVWSMKATPLDLSDGKLYTLLLTSTGVRCKTTASSNVSYSACTG
SGVEQW
Nucleotide
Download Length: 501 bp
>NTDB_id=71562 URS_RS03300 WP_005263832.1 672676..673176(-) (comE) [Acinetobacter ursingii strain M3]
ATGCGTAAATTATCTGGATTCACTCTAATTGAGTTAATGGTCGTAGTGGTGATTATTGCGATTTTAGCTGCGATAGCAAT
ACCAAGCTATCAAAGCTTTATTCGCAAAAATCTAACGGCTCAAGTTCAGCAAGAAATGTTGAAACTAGCTGATCAATTAG
AGAGACATAAAGCTAAAAATTTCTCTTATAAAAAATTTGATCCTAAATATTTATATGCGGGGACTGTTGCTATGCCTGAA
GTATTTGTACCAGGAGGGATATTTAATGTAGCTACATCCAAATATAAAATTGAGTTAAAAGATATTAGCCGTGCGACTAC
TGAAAATTTACTGACCACAGACAATGGAATGGTTTGGTCAATGAAAGCGACTCCATTAGATTTATCAGACGGAAAGCTAT
ATACATTATTGTTAACAAGTACGGGAGTTCGTTGTAAAACCACGGCGAGTTCAAATGTGTCTTATAGTGCTTGTACTGGA
AGTGGAGTAGAACAATGGTAA
ATGCGTAAATTATCTGGATTCACTCTAATTGAGTTAATGGTCGTAGTGGTGATTATTGCGATTTTAGCTGCGATAGCAAT
ACCAAGCTATCAAAGCTTTATTCGCAAAAATCTAACGGCTCAAGTTCAGCAAGAAATGTTGAAACTAGCTGATCAATTAG
AGAGACATAAAGCTAAAAATTTCTCTTATAAAAAATTTGATCCTAAATATTTATATGCGGGGACTGTTGCTATGCCTGAA
GTATTTGTACCAGGAGGGATATTTAATGTAGCTACATCCAAATATAAAATTGAGTTAAAAGATATTAGCCGTGCGACTAC
TGAAAATTTACTGACCACAGACAATGGAATGGTTTGGTCAATGAAAGCGACTCCATTAGATTTATCAGACGGAAAGCTAT
ATACATTATTGTTAACAAGTACGGGAGTTCGTTGTAAAACCACGGCGAGTTCAAATGTGTCTTATAGTGCTTGTACTGGA
AGTGGAGTAGAACAATGGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Acinetobacter baylyi ADP1 |
48.256 |
100 |
0.5 |