Detailed information NTG0715325

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: M0P28_RS11995
• Genome accession: NZ_CP116958
• Coordinates: 2356656..2357750 (+)
• Length: 364 a.a.
• NCBI ID: WP_003067011.1
• Uniprot ID: E0PGK0
• Organism: Streptococcus pasteurianus strain WUSP074
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2351656..2362750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M0P28_RS11970 (M0P28_11970)	pgsA	2352085..2352639 (-)	555	WP_117479520.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
M0P28_RS11975 (M0P28_11975)	-	2352648..2353589 (-)	942	WP_003067002.1	helix-turn-helix domain-containing protein	-
M0P28_RS11980 (M0P28_11980)	yfmH	2353653..2354942 (-)	1290	WP_048791415.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
M0P28_RS11985 (M0P28_11985)	yfmF	2354943..2356187 (-)	1245	WP_041972964.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
M0P28_RS11990 (M0P28_11990)	yaaA	2356276..2356653 (+)	378	WP_013852366.1	S4 domain-containing protein YaaA	-
M0P28_RS11995 (M0P28_11995)	recF	2356656..2357750 (+)	1095	WP_003067011.1	DNA replication/repair protein RecF	Machinery gene
M0P28_RS12000 (M0P28_12000)	-	2357812..2358678 (-)	867	WP_013852367.1	GRP family sugar transporter	-
M0P28_RS12005 (M0P28_12005)	guaB	2358918..2360399 (-)	1482	WP_003067014.1	IMP dehydrogenase	-
M0P28_RS12010 (M0P28_12010)	trpS	2360658..2361680 (-)	1023	WP_013852368.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41782.80 Da
• Isoelectric Point: 6.8963

>NTDB_id=715325 M0P28_RS11995 WP_003067011.1 2356656..2357750(+) (recF) [Streptococcus pasteurianus strain WUSP074]
MWIQKITLKNYRNYLTSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKELIHFDAKELLVSGILQRSSGT
VPLDISLSSKGRVTKVNHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLADLSNYNHVLKQR
NTYLKTAEKVDTDFLAVLDEQLADFGSRVMEHRLDFISNLEKEADRYHYAISNGIEHLSIHYLSSVSFQEKDDIKPNFLK
ALQKNQQRDIFKKNTSVGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIRTVTGDYPILLLDDVMSELDNYRQ
TELLKMIIDKNVQTFITTTSLDHLSQLPDDLKIFTVNQGNIQEN

Nucleotide

• Length: 1095 bp

>NTDB_id=715325 M0P28_RS11995 WP_003067011.1 2356656..2357750(+) (recF) [Streptococcus pasteurianus strain WUSP074]
ATGTGGATTCAAAAAATAACGTTAAAAAATTATCGTAACTATCTGACTAGTGAGCTTGAATTTTCTCCTGGACTTAATGT
TTTCATCGGAAAAAACGCTCAAGGAAAGACAAATTTCTTAGAAGCAATTTATTTCCTTTCTCTTACCCGCAGCCACCGCA
CACGAACAGACAAAGAGTTGATTCATTTTGATGCCAAAGAACTTCTGGTTTCTGGTATTTTACAACGTTCAAGTGGTACT
GTTCCTTTAGATATTAGTCTTTCAAGTAAGGGACGTGTTACAAAAGTTAATCATCTAAAACAAGCTAAGTTATCAGACTA
TATTGGTGTAATGACCGTTGTTCTTTTTGCACCTGAAGATTTACAACTCATCAAAGGCGCTCCAAGCCTTCGTCGAAAAT
TTATTGACATTGATTTAGGGCAAATAAAGCCGATTTATTTAGCTGATTTGTCTAATTATAACCACGTGCTAAAACAGCGT
AATACTTATCTTAAAACGGCTGAAAAAGTTGATACTGATTTTTTAGCTGTGCTTGATGAGCAATTAGCTGATTTTGGTAG
CCGTGTCATGGAACATCGTTTAGATTTCATTTCTAATTTAGAAAAAGAAGCCGACCGCTATCATTATGCCATTTCAAACG
GCATTGAACATCTTAGTATCCATTATCTGTCATCTGTTTCCTTCCAAGAAAAGGATGACATTAAGCCAAACTTCTTAAAA
GCTTTACAGAAAAATCAGCAGCGTGATATTTTCAAAAAAAATACAAGTGTTGGTCCTCACCGCGATGATTTGGAATTTTT
CATCAATGATATGCCAGCAAATTTTGGCAGCCAAGGTCAGCACCGTAGCTTAATCTTATCACTAAAAATGGCTGAAATTG
AGTTAATAAGAACAGTAACTGGTGATTATCCTATTTTGCTTTTAGATGATGTCATGAGCGAGCTTGATAATTATAGACAA
ACCGAACTCTTAAAAATGATTATTGATAAAAACGTTCAAACCTTCATTACAACAACGAGTCTCGACCACCTATCGCAGCT
TCCGGACGACTTAAAAATCTTTACAGTTAATCAAGGTAACATTCAAGAAAATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: E0PGK0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.11	100	0.651
recF	Bacillus subtilis subsp. subtilis str. 168	46.705	95.879	0.448