Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   M0P28_RS06965 Genome accession   NZ_CP116958
Coordinates   1355370..1355810 (-) Length   146 a.a.
NCBI ID   WP_061100410.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP074     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1350370..1360810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P28_RS06950 (M0P28_06950) - 1350546..1351523 (-) 978 WP_117479603.1 alcohol dehydrogenase catalytic domain-containing protein -
  M0P28_RS06955 (M0P28_06955) rcrQ 1351790..1353562 (-) 1773 WP_117479605.1 ABC transporter ATP-binding protein Regulator
  M0P28_RS06960 (M0P28_06960) rcrP 1353552..1355366 (-) 1815 WP_117479607.1 ABC transporter ATP-binding protein Regulator
  M0P28_RS06965 (M0P28_06965) rcrR 1355370..1355810 (-) 441 WP_061100410.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  M0P28_RS06970 (M0P28_06970) - 1355983..1356393 (-) 411 WP_003065257.1 peptide deformylase -
  M0P28_RS06975 (M0P28_06975) - 1356390..1356899 (-) 510 WP_117479609.1 GNAT family N-acetyltransferase -
  M0P28_RS06980 (M0P28_06980) gdhA 1357176..1358525 (-) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -
  M0P28_RS06985 (M0P28_06985) - 1358771..1359268 (+) 498 WP_003065265.1 DUF308 domain-containing protein -
  M0P28_RS06990 (M0P28_06990) queF 1359324..1359815 (-) 492 WP_003065267.1 preQ(1) synthase -
  M0P28_RS06995 (M0P28_06995) queE 1359828..1360541 (-) 714 WP_003065269.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 17085.55 Da        Isoelectric Point: 9.3733

>NTDB_id=715284 M0P28_RS06965 WP_061100410.1 1355370..1355810(-) (rcrR) [Streptococcus pasteurianus strain WUSP074]
MHKKDPFSQFRDFINLAENRVHALAESHGVENLAGPQGFAVLYLHDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IRVISSIEDKRYKQVVLTELGKSKAQNIQDFHDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE

Nucleotide


Download         Length: 441 bp        

>NTDB_id=715284 M0P28_RS06965 WP_061100410.1 1355370..1355810(-) (rcrR) [Streptococcus pasteurianus strain WUSP074]
ATGCATAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAGCGGAAAATCGTGTCCATGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTGGCTGGTCCACAGGGATTTGCAGTGTTGTATCTCCATGATAATCCTGATAAAGAAATTTATA
TCAAGGATATTGAGAAGAGACTAAGAATTTCAAAGTCAGTAACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCGAGTTATTTCGTCAATAGAAGATAAGCGTTATAAGCAAGTGGTGTTGACTGAACTTGGAAAATCAAAGGCTCAAAA
CATTCAAGATTTCCATGATGAAATGCATAGACAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATTTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(35-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

56.643

97.945

0.555