Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   M0P28_RS06955 Genome accession   NZ_CP116958
Coordinates   1351790..1353562 (-) Length   590 a.a.
NCBI ID   WP_117479605.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain WUSP074     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1346790..1358562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P28_RS06925 (M0P28_06925) - 1347164..1347790 (-) 627 WP_003065238.1 ABC transporter permease -
  M0P28_RS06930 (M0P28_06930) - 1347783..1348541 (-) 759 WP_172473475.1 ABC transporter ATP-binding protein -
  M0P28_RS06935 (M0P28_06935) - 1348569..1349489 (-) 921 WP_013851962.1 glycine betaine ABC transporter substrate-binding protein -
  M0P28_RS06940 (M0P28_06940) - 1349479..1350114 (-) 636 WP_013851963.1 ABC transporter permease -
  M0P28_RS06945 (M0P28_06945) - 1350104..1350556 (-) 453 WP_003065246.1 MarR family winged helix-turn-helix transcriptional regulator -
  M0P28_RS06950 (M0P28_06950) - 1350546..1351523 (-) 978 WP_117479603.1 alcohol dehydrogenase catalytic domain-containing protein -
  M0P28_RS06955 (M0P28_06955) rcrQ 1351790..1353562 (-) 1773 WP_117479605.1 ABC transporter ATP-binding protein Regulator
  M0P28_RS06960 (M0P28_06960) rcrP 1353552..1355366 (-) 1815 WP_117479607.1 ABC transporter ATP-binding protein Regulator
  M0P28_RS06965 (M0P28_06965) rcrR 1355370..1355810 (-) 441 WP_061100410.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  M0P28_RS06970 (M0P28_06970) - 1355983..1356393 (-) 411 WP_003065257.1 peptide deformylase -
  M0P28_RS06975 (M0P28_06975) - 1356390..1356899 (-) 510 WP_117479609.1 GNAT family N-acetyltransferase -
  M0P28_RS06980 (M0P28_06980) gdhA 1357176..1358525 (-) 1350 WP_003065263.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65285.37 Da        Isoelectric Point: 5.0350

>NTDB_id=715282 M0P28_RS06955 WP_117479605.1 1351790..1353562(-) (rcrQ) [Streptococcus pasteurianus strain WUSP074]
MENKKKTSFYDRMKPYIRGFQLPFLLAVIGAIVSATVTVIGPDKLKEITNTITKGLTPTATGMIPGIDLDKVGKIALTLA
ILYVISAVVGYIQSFTVATIVQRFSQRLRKAIQTKIDKVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSTML
LIGSIFMMFHSNVSMALTAIGSVLIGFVLVMVIMGSSQPLFKRQQNNLAAINGYVEEIYSGHNVVTSYNAAGETSETFKK
LNTNLYKSMWQSQFLSGIMMPLMIFVGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEDEMEDESDKERQLSDVNGEVTFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQITIDGVDTRLMTREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVIAAAKAVGVHHFIMTLPKGYDT
YLDDSVTLSIGQKQLLTIARALLKDSPLLILDEATSSVDTRTEELIQKAMDKLMEGCTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDDLMQQGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=715282 M0P28_RS06955 WP_117479605.1 1351790..1353562(-) (rcrQ) [Streptococcus pasteurianus strain WUSP074]
ATGGAAAATAAGAAAAAAACATCTTTCTATGACAGAATGAAGCCCTATATTAGAGGTTTCCAGCTTCCATTTCTTCTTGC
AGTGATTGGAGCAATTGTTTCTGCGACGGTTACGGTTATTGGACCTGATAAATTAAAAGAAATCACCAATACAATCACCA
AAGGTTTGACACCAACGGCGACTGGTATGATTCCAGGAATCGACTTGGATAAAGTTGGTAAAATTGCATTAACTTTGGCA
ATTTTATACGTTATTTCAGCAGTAGTTGGTTATATTCAAAGCTTTACCGTAGCGACTATCGTTCAACGTTTTTCACAACG
TTTACGTAAAGCTATTCAGACCAAAATTGACAAGGTTCCATTGAATTACTTTGATAGTCATTCGCAAGGGGACACCCTTT
CTCGTGTGACAAATGACGTTGACTTGCTTGGTCAATCGCTTAACCAAAGTTTGGGAACTTTGGTGACATCAACCATGTTA
TTGATTGGATCAATTTTCATGATGTTCCATTCAAATGTCAGCATGGCTCTAACAGCGATTGGGTCTGTTCTGATTGGTTT
TGTTTTGGTTATGGTTATCATGGGCTCATCACAACCATTGTTCAAACGTCAACAAAATAACTTGGCTGCGATTAATGGTT
ATGTTGAAGAAATTTACTCTGGTCATAATGTGGTAACAAGTTATAACGCTGCTGGTGAAACAAGCGAAACCTTTAAAAAA
TTAAACACCAATCTTTATAAATCAATGTGGCAATCACAGTTCTTGTCAGGTATTATGATGCCGCTTATGATTTTCGTTGG
GAACTTTGGTTATGTTATGGTCTGTGTGGTTGGTGCCGTTAAAGTTATCAATGGTGATATTACCATGGGGGATGTGGTTG
CCTTTATGACTTATGTTCGTATCTTCTCACAACCATTGTCACAAATTGCGCAAGCTTTCACACAAATGCAATCAGCAACA
GCTGCCATGAGCCGTGTCTTTGAATTCCTTGAAGAAGATGAAATGGAAGATGAGTCTGATAAGGAACGTCAACTTAGTGA
TGTTAATGGTGAAGTTACCTTTGATAATGTTTTCTTTGGTTATTCTAAGGATAAAACAATTATCCATGATTTCTCCGCTG
TGGCGAAACCTGGTCAGAAAGTTGCCATTGTTGGACCAACAGGCGCTGGTAAAACAACCATTGTTAACCTGCTCATGAAA
TTCTATGAAATCGATAAAGGTCAAATCACTATTGATGGTGTGGATACACGTTTGATGACACGTGAAGAAGTGCATGACCA
ATTCTCAATGGTGCTTCAAGATACGTGGTTGTTTGAAGGAACAATCAAAGAAAACTTGATTTACAATCAAGAAAATATTA
CAGACGAACAAGTTATTGCAGCGGCTAAGGCTGTTGGTGTTCATCACTTTATCATGACACTTCCAAAGGGTTATGACACT
TATCTTGATGATTCTGTAACACTTTCAATTGGTCAAAAACAACTCTTGACGATTGCGCGTGCTCTTTTGAAAGATTCACC
GCTCCTTATTTTGGACGAAGCAACGTCATCAGTTGATACACGTACTGAAGAATTGATTCAAAAAGCTATGGATAAATTGA
TGGAAGGTTGTACATCATTTGTTATCGCTCACCGTTTGTCAACGATTAGAAACGCTGACCTTATCCTTGTGATGAAAGAT
GGTAACATCATCGAACAAGGCAATCACGATGATTTGATGCAACAAGGCGGATTCTATGCTGACCTCTACAACTCACAATT
TGAAGTAGCTTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(370-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.142

100

0.734