Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   M0P28_RS02120 Genome accession   NZ_CP116958
Coordinates   380521..381555 (+) Length   344 a.a.
NCBI ID   WP_003063395.1    Uniprot ID   E0PBR9
Organism   Streptococcus pasteurianus strain WUSP074     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 375521..386555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M0P28_RS02095 (M0P28_02095) - 375708..377180 (+) 1473 WP_101774347.1 glycoside hydrolase family 1 protein -
  M0P28_RS02100 (M0P28_02100) - 377484..378576 (-) 1093 Protein_357 IS3 family transposase -
  M0P28_RS02105 (M0P28_02105) - 379012..379314 (-) 303 WP_003063390.1 hypothetical protein -
  M0P28_RS02110 (M0P28_02110) - 379311..379730 (-) 420 WP_117479973.1 HIT family protein -
  M0P28_RS02115 (M0P28_02115) pptA 379794..380519 (+) 726 WP_117479971.1 ABC transporter ATP-binding protein Regulator
  M0P28_RS02120 (M0P28_02120) pptB 380521..381555 (+) 1035 WP_003063395.1 ABC transporter permease Regulator
  M0P28_RS02125 (M0P28_02125) ccrZ 381620..382414 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  M0P28_RS02130 (M0P28_02130) trmB 382414..383052 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  M0P28_RS12065 - 383578..384055 (+) 478 Protein_364 hypothetical protein -
  M0P28_RS02145 (M0P28_02145) rimP 384308..384793 (+) 486 WP_172456429.1 ribosome maturation factor RimP -
  M0P28_RS02150 (M0P28_02150) nusA 384878..386068 (+) 1191 WP_043910362.1 transcription termination factor NusA -
  M0P28_RS02155 (M0P28_02155) rnpM 386088..386384 (+) 297 WP_003063410.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39754.84 Da        Isoelectric Point: 10.5816

>NTDB_id=715239 M0P28_RS02120 WP_003063395.1 380521..381555(+) (pptB) [Streptococcus pasteurianus strain WUSP074]
MKEVFQKRRSAFLGQCLKYLRYVFNDHFVLVLVFLTGFLMVQYSQLLRQFPSQTVVIDVILVLVILVLLSLGKIATYLEA
PDKLFYLPKEIEILQWLSQARRRAFVIWTIVQTAILVLLAPIFFKLGFSTVTFGILLLALAVVKWLVMKEKSKVFFSQGK
FSWDAAISYEAKRRQGVLKFFSLFTTVKGISASVKRRSYLDSLLGLVKKTHAKTWSNLYLRAFLRSSDYFALTLRLLALS
LLALIFISNRLVAVGLALVFNYLLLFQLLTLSQHFDYQYLTNLYPISEKQKAANLKTFLKKLSYLLGFLELLLTFSWQAA
GLLILVTVIITEWYLPYKINKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=715239 M0P28_RS02120 WP_003063395.1 380521..381555(+) (pptB) [Streptococcus pasteurianus strain WUSP074]
ATGAAAGAAGTTTTTCAAAAGCGCCGTAGTGCTTTTTTAGGGCAATGCTTAAAGTATCTTCGTTATGTCTTTAATGACCA
TTTTGTGCTAGTCTTGGTTTTCTTAACAGGTTTTCTGATGGTTCAATACAGCCAGCTGTTACGTCAGTTTCCAAGTCAGA
CAGTCGTTATTGACGTGATTTTGGTCTTGGTTATCCTTGTTTTGCTTAGCCTTGGGAAGATTGCGACTTATTTGGAAGCA
CCTGATAAATTGTTCTATTTGCCAAAAGAAATTGAGATTTTGCAATGGCTATCACAGGCAAGACGTCGTGCTTTTGTGAT
TTGGACAATCGTGCAAACGGCAATTCTTGTTTTATTAGCTCCCATCTTCTTTAAACTAGGTTTTTCAACGGTTACCTTTG
GCATTTTATTGCTTGCTTTAGCGGTTGTGAAATGGCTTGTAATGAAAGAAAAAAGCAAGGTATTCTTTTCTCAAGGAAAA
TTTTCATGGGATGCTGCCATTTCTTATGAAGCAAAACGTCGTCAAGGAGTGCTTAAATTCTTTTCACTTTTCACAACGGT
TAAGGGAATTTCAGCTAGTGTGAAACGTCGTTCGTACTTGGATAGTTTGCTTGGTTTGGTCAAAAAAACACATGCCAAAA
CATGGTCAAATTTATACCTACGTGCGTTTTTACGGAGTTCAGATTATTTTGCTTTAACCTTGCGATTACTCGCATTGAGC
TTGCTTGCGCTTATCTTTATTTCCAATCGCTTGGTAGCAGTTGGCTTGGCTTTGGTCTTTAATTATTTATTACTTTTTCA
ATTATTAACCCTATCCCAACATTTTGATTATCAATATTTGACCAATCTTTATCCAATTTCTGAAAAGCAAAAGGCGGCTA
ATTTAAAGACATTTTTGAAAAAATTATCGTATTTATTGGGCTTTTTGGAGTTGTTATTAACGTTTTCTTGGCAAGCAGCA
GGCTTATTGATTTTGGTAACGGTTATTATTACAGAATGGTATCTTCCTTACAAAATCAATAAGATGATTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB E0PBR9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.221

100

0.462

  pptB Streptococcus salivarius strain HSISS4

45.64

100

0.456