Detailed information NTG0715213

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: M0P24_RS11650
• Genome accession: NZ_CP116957
• Coordinates: 2275039..2276133 (+)
• Length: 364 a.a.
• NCBI ID: WP_069789096.1
• Uniprot ID: -
• Organism: Streptococcus pasteurianus strain WUSP070
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2270039..2281133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M0P24_RS11625 (M0P24_11625)	pgsA	2270468..2271022 (-)	555	WP_003066999.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
M0P24_RS11630 (M0P24_11630)	-	2271031..2271972 (-)	942	WP_003067002.1	helix-turn-helix domain-containing protein	-
M0P24_RS11635 (M0P24_11635)	yfmH	2272036..2273325 (-)	1290	WP_013852359.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
M0P24_RS11640 (M0P24_11640)	yfmF	2273326..2274570 (-)	1245	WP_013852360.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
M0P24_RS11645 (M0P24_11645)	yaaA	2274659..2275036 (+)	378	WP_013852366.1	S4 domain-containing protein YaaA	-
M0P24_RS11650 (M0P24_11650)	recF	2275039..2276133 (+)	1095	WP_069789096.1	DNA replication/repair protein RecF	Machinery gene
M0P24_RS11655 (M0P24_11655)	-	2276195..2277061 (-)	867	WP_013852367.1	GRP family sugar transporter	-
M0P24_RS11660 (M0P24_11660)	guaB	2277301..2278782 (-)	1482	WP_003067014.1	IMP dehydrogenase	-
M0P24_RS11665 (M0P24_11665)	trpS	2279041..2280063 (-)	1023	WP_013852368.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41733.78 Da
• Isoelectric Point: 7.1290

>NTDB_id=715213 M0P24_RS11650 WP_069789096.1 2275039..2276133(+) (recF) [Streptococcus pasteurianus strain WUSP070]
MWIQKITLKNYRNYLTSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKELIHFDAKELLVSGILQRSSGT
VPLDISLSSKGRVTKVNHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLADLSNYNHVLKQR
NTYLKTAEKVDTDFLAVLDEQLADFGSRVMEHRLDFISNLEKEADRYHYAISNGIEHLSIHYLSSVSFQEKDGIKPNFLK
ALQKNHQRDIFKKNTSVGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIRTVTGDYPILLLDDVMSELDNYRQ
TELLKMIIDKNVQTFITTTSLDHLSQLPDDLKIFTVNQGNIQEN

Nucleotide

• Length: 1095 bp

>NTDB_id=715213 M0P24_RS11650 WP_069789096.1 2275039..2276133(+) (recF) [Streptococcus pasteurianus strain WUSP070]
ATGTGGATTCAAAAAATAACGTTAAAAAATTATCGTAACTATCTGACTAGTGAGCTTGAATTTTCTCCTGGACTTAATGT
TTTCATCGGAAAAAACGCTCAAGGAAAGACAAATTTCTTAGAAGCAATTTATTTCCTTTCTCTTACCCGCAGCCACCGCA
CACGAACAGACAAAGAGTTGATTCATTTTGATGCCAAAGAACTTCTGGTTTCTGGTATTTTACAACGTTCAAGTGGTACT
GTTCCTTTAGATATTAGTCTTTCAAGTAAGGGACGTGTTACAAAAGTTAATCATCTAAAACAAGCTAAGTTATCAGACTA
TATTGGTGTAATGACCGTTGTTCTTTTTGCACCTGAAGATTTACAACTCATCAAAGGCGCTCCAAGCCTTCGTCGAAAAT
TTATTGACATTGATTTAGGGCAAATAAAGCCGATTTATTTAGCTGATTTGTCTAATTATAACCACGTGCTAAAACAGCGT
AATACTTATCTTAAAACGGCTGAAAAAGTTGATACTGATTTTTTAGCTGTGCTTGATGAGCAATTAGCTGATTTTGGTAG
CCGTGTCATGGAACATCGTTTAGATTTCATTTCTAATTTAGAAAAAGAAGCCGACCGCTATCATTATGCCATTTCAAACG
GCATTGAACATCTTAGTATCCATTATCTGTCATCTGTTTCCTTCCAAGAAAAGGATGGCATTAAGCCAAACTTCTTAAAA
GCTTTACAGAAAAATCATCAGCGTGATATTTTCAAAAAAAATACAAGTGTTGGTCCTCACCGCGATGATTTGGAATTTTT
CATCAATGATATGCCAGCAAATTTTGGCAGCCAAGGTCAGCACCGTAGCTTAATCTTATCACTAAAAATGGCTGAAATTG
AGTTAATAAGAACAGTAACTGGTGATTATCCTATTTTGCTTTTAGATGATGTCATGAGCGAGCTTGATAATTACAGACAA
ACCGAACTCTTAAAAATGATTATTGATAAAAACGTTCAAACCTTCATTACAACAACGAGTCTCGACCACCTATCGCAGCT
TCCGGACGACTTAAAAATCTTTACAGTTAATCAAGGTAACATTCAAGAAAATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.11	100	0.651
recF	Bacillus subtilis subsp. subtilis str. 168	46.418	95.879	0.445